Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0976 ATGGGTGAACAGTTGGGGCAGCTAAAAGTTATAGTTGTGCAAGGGAAAAGGTTGGTGATCCGGGATTTCAAGAGTAGCGATCCTTATGTTGTGCTCAAACTAGGGAATCAGACAGCAAAGACCAAGGTCATTAATAGCTGTTTGAATCCTGTTTGGAATGAAGAGCTGAACTTCACTCTGAAAGAACCCTTGGGAATTCTGAACTTGGAAGTATTTGATAAAGATCTTTTGAAGTCAGATGACAAGATGGGCAATGCCTTCCTCAACCTTCAACCATTAGTCTCTGCAGCTAGGTTAAGAGACATCTTAAGAGTCTCATCTGGTGAGACAACACTAAGGAAGGTTATACCTGACAGTGAAAACTGCCTTGTCCGTGAAAGCAGCATCAATTGTGTTGATGGAGAGGTGGTGCAGAGTGTTTGGTTAAGGCTTCGTGGTGTTGAATCTGGGGAGTTAGAATTGACCATCAAGTTGATCACACCTGTTGCTCCCTAA 495 0.4323 MGEQLGQLKVIVVQGKRLVIRDFKSSDPYVVLKLGNQTAKTKVINSCLNPVWNEELNFTLKEPLGILNLEVFDKDLLKSDDKMGNAFLNLQPLVSAARLRDILRVSSGETTLRKVIPDSENCLVRESSINCVDGEVVQSVWLRLRGVESGELELTIKLITPVAP* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0976 164 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 11 1 161 - -
Dod03g0976 164 Gene3D C2 domain 4 162 IPR035892 -
Dod03g0976 164 SMART C2_3c 7 102 IPR000008 -
Dod03g0976 164 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Dod03g0976 164 CDD C2_ArfGAP 5 150 - -
Dod03g0976 164 Pfam C2 domain 6 99 IPR000008 -
Dod03g0976 164 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 159 IPR035892 -
Dod03g0976 164 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 161 IPR044562 -
Dod03g0976 164 PRINTS C2 domain signature 67 75 IPR000008 -
Dod03g0976 164 PRINTS C2 domain signature 22 34 IPR000008 -
Dod03g0976 164 PRINTS C2 domain signature 46 59 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0976 Dod-Chr3 11883500 11886633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0976 1 159 C2H2 Transcription Factor Family AT4G05330 44.654 1.77e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0976 - - gmx:100779624 305.064