Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod03g0964 | ATGGCTGAATCAGACAACGAATCAGGGGGTCAAACGGGTAACGCAAGTGGAAGCAACGAGTTCAGAGAGCAAGACAGGTTCCTTCCCATAGCGAACGTGAGCAGGATCATGAAGAAGGCTTTGCCGGCGAACGCGAAGATCTCGAAGGAGGCGAAGGAGACGGTGCAGGAGTGCGTGTCGGAGTTCATAAGCTTCATAACTGGGGAGGCTTCAGATAAGTGCCAGAAAGAGAAGAGGAAGACGATCAACGGCGACGATCTTCTGTGGGCGATGACCACGCTGGGGTTCGAGGAGTACGTGGAGCCTCTTAAGGTTTACCTTCAGAAGTACAGGGAGATGGAAGGGGAGAGGAATGCTTTTATTGGAGGAGGAGGAGGAGGGAGGGGTGGCGGTGGCGGTGGTGGTGATCAGAGGGATCATCATGGGGATGGTGGTGATGGTTATGGTGTGCCATCACATATGATGATGATGATGGGGCATCAGCATCATCAAGGACACATGTATGGATCTGGGAGTGGAGGGTCAGCATCATCTTCTGGAAGGACTAGGTAG | 552 | 0.5308 | MAESDNESGGQTGNASGSNEFREQDRFLPIANVSRIMKKALPANAKISKEAKETVQECVSEFISFITGEASDKCQKEKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQKYREMEGERNAFIGGGGGGRGGGGGGGDQRDHHGDGGDGYGVPSHMMMMMGHQHHQGHMYGSGSGGSASSSGRTR* | 184 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod03g0964 | 183 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Dod03g0964 | 183 | MobiDBLite | consensus disorder prediction | 121 | 183 | - | - | |
Dod03g0964 | 183 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 27 | 91 | IPR003958 | - | |
Dod03g0964 | 183 | PRINTS | CCAAT-binding transcription factor subunit A signature | 74 | 92 | - | - | |
Dod03g0964 | 183 | PRINTS | CCAAT-binding transcription factor subunit A signature | 55 | 73 | - | - | |
Dod03g0964 | 183 | PRINTS | CCAAT-binding transcription factor subunit A signature | 93 | 111 | - | - | |
Dod03g0964 | 183 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y PROTEIN | 1 | 165 | - | - | |
Dod03g0964 | 183 | SUPERFAMILY | Histone-fold | 24 | 122 | IPR009072 | GO:0046982 | |
Dod03g0964 | 183 | Gene3D | Histone, subunit A | 15 | 122 | IPR009072 | GO:0046982 | |
Dod03g0964 | 183 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Dod03g0964 | 183 | MobiDBLite | consensus disorder prediction | 168 | 183 | - | - | |
Dod03g0964 | 183 | ProSitePatterns | NF-YB/HAP3 subunit signature. | 58 | 74 | IPR003956 | GO:0005634|GO:0006355|GO:0043565 | |
Dod03g0964 | 183 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 1 | 165 | IPR027113 | GO:0001228|GO:0006355|GO:0016602 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod03g0964 | Dod-Chr3 | 11779377 | 11780611 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod03g0964 | 1 | 125 | CCAAT-HAP3 Transcription Factor Family | AT4G14540 | 82.677 | 3.50e-71 | 211 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YB | Dod03g0964 | CBFD_NFYB_HMF | 1.4e-27 | CL0012 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod03g0964 | K08065 | - | gmx:100778034 | 225.713 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod05g2925 | 05 | 55183035 | 55187459 | Dod03g0964 | 03 | 11779377 | 11780611 | PCT |