LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod03g0944	ATGTCTTCTGCGGAGGGTGGTGCTGCTGTTTTTGTGACATGGGAGGAGCGAGTTATATGCCAGGAGCGTGGGAACCGTGTGATCCACTTCTACCTGAAGGATGAGTCGGGGAATTCGGTGCTTGCTGTTGTTGGTACTGAGAGGAGTGTGAGGCACATGATGTATGTTGTCCCTGACCATTTCTTGCAGGCTTATGGATCCACACATTCCATCAATGCGTGTAAATGGAGGGCAAGGAGAGAGGTTGTCGAATGGCTCACTTGCTTGGTCTCCAGGAACAACCCTCATCAGTCAGGTGTACAGCTGGATGATTCAGCACAAGCTTTAGAACCTCTCAAGGTATTAACAACTGGAATCAGTGCAAGTAAAAAATATTTACCTGATAAAATGATTTCGAGGAAATTGAAATTTCAAAGTTCAGATATTGAATGGTCAGGCATTGCTTGGTTTTGTGCTAAACAGCTGAAACACTACCCTGGGTTTCGCAGGAACGGGACAACCATTTATGTTCATTCATTTGTATATATTATGGCTGAAGAAGAAAGCCATTATCTAGGTTACCTGGAAGATATGTATGAAGACAAGAAGAAACAAAAAAAGGTTAAGGTACGGTGGTTTCACCATGGTCAGGAAGTTAAGCAGGTGATTCCACAGCTGAATCTGCAAGAGGGAGAGGTTTTCATAACTCCTCATGTTCAAGTGATCAGTGCTGAGTGTGTCAATGGTCCTGCAATAGTTTTGACCCCTAAGCATTATGAGAAATGCCTGTCTGCTATGCTACACACCTCTTTATCTGAGATCCATATGTGCTTTAGGCAGTTCAAAAACAATAAGCTTAAGCCCTTTGCACTTACTAAGTTGCGTGGCTATGTTAACCAATCTGTGCTTTCCTTTTTGAATAGTCCTATTCTCTCCAAGAGAAAGGCCAAAGATGATGAGGACTTCACTCAAGATGATCCTGTAAGGTCCAGCAATAAGAGGAATAAAAGTTGGAAGGGGTATCAAGTACTTGAAAATGGTTCTTCTGATCTGCTTGACTTTGCTCCTATGAATGAGATGGCGAAATGTCAACCAAAATTCCCAAGTTTGAAATTAAAACTATCAAGAAAAACAATGGGTATCAAGGTTGTCGGACCCAAGCCTCAGTATCATCTGTCTTTTAATGTCGATGAAAAGATAGAGGTTCTCTGTCAAGATAGTGGCATTCGAGGATGCTGGTTCAGATGTAAAATCTTGAATGCATCTCAGAGGCAGCTGAAGGTCCAGTATGATGATTTGCTGGATGTAGATGGGCTAGAGAAGCTAGAGGAATGGGTCCCTGCATCTAGAGTAGCAGCTCCTGACAAACTGGGAATGAGGTGTTCAGGCCGCTTAACAGTACGACCATGCCCTCCTAATGATACTGTACATACTTTTGAGATTGGAGTTCCAGTGGATGCCTGGTGGAGCGATGGATGGTGGGAAGGTGTTATAACTGCAGTTGATGTTAGTGGAGTTGGAAAAGTGCAAATTTATACCCCTGGTGAAGATAGGTTGCTAATGGTTGACAAGAAGGACATTCGGACTTCCCGAGATTGGATTGGTAACAGGTGGGTTGATATACTGGGAAAGCCTGACATTTGCAGCTATATATCTTCAAATGTTGGTACGCACATCAGGCTGTCAGCTAATTCTGCTGTGATAGATGGATCTATGTCTGATTGTTCTGCAATATTAGAAAGTAAATCATCATTGATTCCCAAAGTTGAAGTTGCGCAAAAGGTTGAGCCAGAATTATCTGGTTTGGAAGCACCTGGTGAACTGGAAAGTATGAACGGAGTAACTTTGAGGAAGCCACTCCATGCCATTGACGAAGACAAGGATATTTACTCTGGTGGTGGCGGTGACGGGGACACCGACAATGTTGATGGTGATGATCGGAAGCCACTTGATGCTATTGATAATGACAAGGACAACGCTGTTGGTGATGACAAGGACGCTGCTAGTTGTGACACAGGAAATGATGATGATGGTGGTCACAATACTGAAGAGAACAATGAGGAAAGTTTGATGAAAGAAAATTTTGATTCTGCAGAACAAAAACTTGATGCTGCAGAAGCAAGTAAAGTTGCATGA	2115	0.4298	MSSAEGGAAVFVTWEERVICQERGNRVIHFYLKDESGNSVLAVVGTERSVRHMMYVVPDHFLQAYGSTHSINACKWRARREVVEWLTCLVSRNNPHQSGVQLDDSAQALEPLKVLTTGISASKKYLPDKMISRKLKFQSSDIEWSGIAWFCAKQLKHYPGFRRNGTTIYVHSFVYIMAEEESHYLGYLEDMYEDKKKQKKVKVRWFHHGQEVKQVIPQLNLQEGEVFITPHVQVISAECVNGPAIVLTPKHYEKCLSAMLHTSLSEIHMCFRQFKNNKLKPFALTKLRGYVNQSVLSFLNSPILSKRKAKDDEDFTQDDPVRSSNKRNKSWKGYQVLENGSSDLLDFAPMNEMAKCQPKFPSLKLKLSRKTMGIKVVGPKPQYHLSFNVDEKIEVLCQDSGIRGCWFRCKILNASQRQLKVQYDDLLDVDGLEKLEEWVPASRVAAPDKLGMRCSGRLTVRPCPPNDTVHTFEIGVPVDAWWSDGWWEGVITAVDVSGVGKVQIYTPGEDRLLMVDKKDIRTSRDWIGNRWVDILGKPDICSYISSNVGTHIRLSANSAVIDGSMSDCSAILESKSSLIPKVEVAQKVEPELSGLEAPGELESMNGVTLRKPLHAIDEDKDIYSGGGGDGDTDNVDGDDRKPLDAIDNDKDNAVGDDKDAASCDTGNDDDGGHNTEENNEESLMKENFDSAEQKLDAAEASKVA*	705

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod03g0944	704	MobiDBLite	consensus disorder prediction	619	704	-	-
	Dod03g0944	704	SMART	agenet_At_2	385	450	IPR014002	-
	Dod03g0944	704	SMART	agenet_At_2	470	528	IPR014002	-
	Dod03g0944	704	MobiDBLite	consensus disorder prediction	633	696	-	-
	Dod03g0944	704	ProSiteProfiles	BAH domain profile.	166	285	IPR001025	GO:0003682
	Dod03g0944	704	Coils	Coil	681	701	-	-
	Dod03g0944	704	Pfam	Agenet domain	391	465	IPR008395	-
	Dod03g0944	704	Gene3D	-	149	359	IPR043151	-
	Dod03g0944	704	PANTHER	AGENET DOMAIN-CONTAINING PROTEIN-RELATED	9	588	-	-
	Dod03g0944	704	PANTHER	BROMO ADJACENT-LIKE DOMAIN PROTEIN	9	588	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod03g0944	Dod-Chr3	11598733	11606016	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod03g0944	399	526	PHD Transcription Factor Family	AT5G58610	29.323	2.20e-08	55.8

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod03g0944	-		-	gmx:100816046	986.097

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