Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0937 ATGCGAACTTCCCAGAAACACTCAACCGCAGCTGGTATCCATTTATACCACCAGCCTGTGCAAGGCGTTGATCCCTACAATCATTTCCAAATACTACAAAGCAATTCATGCCATGACATTCATGATAGCAGCAGCCAGGGAACCGGTGTTTCATTTGAACCCTGCAAGGAGCAATACTTTACCCTTGAATCATCCCCAGCAACCAATGGTCTCATAGGTTGTGATTCTCCTTCCTGTGCCAGTGTATCATCCAATAGGAGTCCCTTTTCTCCTCAAGGCTCTCAATCATACTATTCAGACCAGCACCAGTCATCTGACAACAACTATGGATCACCAATAAGTGGTTGCTCAAGTGCTGATGATGGCTATGAATGGAAGCACAAACTTAAAGAATTGGAAATTTCATTGTTGGGGCCTGAGTCAGATAATATTGTTGATAGTTGTCACTGCTGCTTCAAGGGTGCTCATCAAGGAGCAACTCCAATGTCTGAATACAATTGGGATCAGATTGCAGAAAGGATTCCAGAGTTAGACTTGAGAGATGTTCTCATTCGGTGTGCACGAGCTGTGGCTGATGAGGACTATCAAACAGCAATAGGGTGGATGGATAATGTCTTGGTAAAGATGGTATCAGTTGCTGGGGATCCAATCCAGAGGTTGGGTGCTTACATGTTGGAAGGTCTAAGAGCAAGGCTGGAATCATCAGGGAGCCTAATCTACAGGGCCTTGAAGTGTGAACAACCAACAGGCAAAGATCTAATGACTTACATGCATGTCCTGTACAAGATTTGTCCTTATTGGAAGTTTGCTTACATATCTGCAAATGTTGTCATTGGAGAAGCAATGCAAAATGAACCGAGAATTCACATAATTGACTTCCAAATTGCACAAGGCACACAGTGGTTGCTACTCATCCAGGCTCTTGCATCAAGGCCTGGTGGACCTCCATTCATCCGTGTCACTGGTGTTGATGATTCCCAATCACATCATGCTAGGGGTGGAGGCCTTCACATTGTGGGGAAAAGGCTTTCTGATTATGCCAAGTCCTGTGCGGTGCCATTTGAGTTCCACAGTGCTGCCATGTGTGGCTCTCAGGTTGAACTAGAAAACCTTGTAATTCAACCTGGGGAAGCTCTAGCTGTGAACTTCCCTTTTGTTTTGCATCACATGCCAGATGAGAGTGTGAGCATTGAGAACCATAGAGACAGGCTCTTGAGGCTGGTGAAGAGCTTGTCACCTAAAGTTGTGACCCTTGTTGAGCAAGAATCCAACACCAACACTTCACCCTTTTTCCAAAGGTTTGTTGAGACCTTGAATTACTACACTGCTATGTTTGAATCCATTGATGTGGCTCGCCCCAGGGACGACAATCAAAGGATCAGTGCAGAACAGCACTGCGTGGCTCGCGACATAGTAAACATGATAGCTTGTGAGGGTGCTGAGAGGGTGGAAAGGCATGAGCTTCTAGGCAAGTGGAGGTCAAGATTTTCAATGGCAGGGTTTGCACCTTGCCCCTTGAGTCACTCAGTGATGGATGCAGTTACAAATCTCTTGAATGAATTCAATGAGAATTATAGGGTTGAGCAGAGAGAAGGTGCTCTCTATCTATGGTGGAAGAATAGAGCTTTGTCCACTTCTTCTGCTTGGATATGTCGCTAG 1659 0.4545 MRTSQKHSTAAGIHLYHQPVQGVDPYNHFQILQSNSCHDIHDSSSQGTGVSFEPCKEQYFTLESSPATNGLIGCDSPSCASVSSNRSPFSPQGSQSYYSDQHQSSDNNYGSPISGCSSADDGYEWKHKLKELEISLLGPESDNIVDSCHCCFKGAHQGATPMSEYNWDQIAERIPELDLRDVLIRCARAVADEDYQTAIGWMDNVLVKMVSVAGDPIQRLGAYMLEGLRARLESSGSLIYRALKCEQPTGKDLMTYMHVLYKICPYWKFAYISANVVIGEAMQNEPRIHIIDFQIAQGTQWLLLIQALASRPGGPPFIRVTGVDDSQSHHARGGGLHIVGKRLSDYAKSCAVPFEFHSAAMCGSQVELENLVIQPGEALAVNFPFVLHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETLNYYTAMFESIDVARPRDDNQRISAEQHCVARDIVNMIACEGAERVERHELLGKWRSRFSMAGFAPCPLSHSVMDAVTNLLNEFNENYRVEQREGALYLWWKNRALSTSSAWICR* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0937 552 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 549 IPR005202 -
Dod03g0937 552 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 20 549 - -
Dod03g0937 552 ProSiteProfiles GRAS family profile. 170 550 IPR005202 -
Dod03g0937 552 Coils Coil 511 531 - -
Dod03g0937 552 MobiDBLite consensus disorder prediction 85 113 - -
Dod03g0937 552 Pfam GRAS domain family 179 549 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0937 Dod-Chr3 11501479 11504121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0937 1 549 GRAS Transcription Factor Family AT4G17230 60.727 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod03g0937 GRAS 3e-126 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0937 - - gmx:100819190 936.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2904 05 54937207 54940659 Dod03g0937 03 11501479 11504121 PCT