Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0896 ATGAAGCTCGACGACACCTCCAACGGCGACACGAAACCGTCGGAATCCTTCGCCGCCGCCGGCGACAATGACCACGACGAGGAGGAGGTGCTGGTTCCTCCGCTGAACTTCGCGATGGTCGACAACGGCATTTTCCGATCAGGTTTTCCCGATTCTGCCAATTTCGGGTTCCTGAAATCGCTTCGCCTCCGTTCCGTTATATGTTTGTGTCCCGAACCCTATCCCGAATCCAATTTGGAGTTTCTGAAGACTCACGGAATTAGGCTCTACCAATTCGGGATCGATGGCTGTAAGGAACCCTTTGTCAACATCCCAGATGATACAATTCGGGAAGCTTTGCAAGTAGTCCTAGATGATAGGAACCATCCCCTGCTAATTCATTGTAAACGAGGGAAGCACCGCACTGGTTGTCTTGTGGGATGCTTAAGAAGACTGCAGAGATGGTGTCTATCATCTGTTTTTGATGAGTACCAGAGGTTTGCAGCTTCCAAGGCCAGAGTGTCAGACCAGAGGTTCATAGAATTGTTTGACGTTTCTTGTCTGAAGCACCACCCATTGTCATTTTCATGCTCAAGGAAATAG 582 0.4948 MKLDDTSNGDTKPSESFAAAGDNDHDEEEVLVPPLNFAMVDNGIFRSGFPDSANFGFLKSLRLRSVICLCPEPYPESNLEFLKTHGIRLYQFGIDGCKEPFVNIPDDTIREALQVVLDDRNHPLLIHCKRGKHRTGCLVGCLRRLQRWCLSSVFDEYQRFAASKARVSDQRFIELFDVSCLKHHPLSFSCSRK* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0896 193 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 31 177 IPR029021 -
Dod03g0896 193 MobiDBLite consensus disorder prediction 1 25 - -
Dod03g0896 193 ProSiteProfiles Dual specificity protein phosphatase domain profile. 36 188 IPR020422 GO:0006470|GO:0008138
Dod03g0896 193 Gene3D Protein tyrosine phosphatase superfamily 30 180 IPR029021 -
Dod03g0896 193 CDD PFA-DSP_Siw14 31 177 - -
Dod03g0896 193 PRINTS Plant and fungal dual specificity phosphatase signature 31 48 IPR020428 GO:0016791
Dod03g0896 193 PRINTS Plant and fungal dual specificity phosphatase signature 68 81 IPR020428 GO:0016791
Dod03g0896 193 PRINTS Plant and fungal dual specificity phosphatase signature 87 101 IPR020428 GO:0016791
Dod03g0896 193 PRINTS Plant and fungal dual specificity phosphatase signature 104 118 IPR020428 GO:0016791
Dod03g0896 193 Pfam Tyrosine phosphatase family 31 185 IPR004861 -
Dod03g0896 193 PANTHER TYROSINE-PROTEIN PHOSPHATASE 16 192 - -
Dod03g0896 193 PANTHER - 16 192 - -
Dod03g0896 193 ProSitePatterns Tyrosine specific protein phosphatases active site. 126 136 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0896 Dod-Chr3 11059861 11062554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0896 29 193 Protein tyrosine phosphatase (PTP) family AT4G03960 75.152 9.44e-97 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0896 K18045 - gmx:100785520 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0896 03 11059861 11062554 Dod03g0896 03 11059861 11062554 ECH