Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0886 ATGTGCCTCTTCTTACCTGAAAAACCACACCCTTATTCTGAGCTCCGCAGCTGCGGCGGGAACAACCAAACCACAATGGCTCATAATATGGTTCTCTCTCTCTTTGTGCCATTCTCTTTGATGATCCTCTTCTTCTTCTCAGCTCTTCCTTTTGCTCTTGCCAACACTGACCCTTCTGATGTTCAAGCTCTTGGGGTGTTGTACAACTCGTTGAATAGCCCATCTGTGCTAACGGGTTGGAAAGTTGGTGAAGGTGATCCTTGCGGAGAGTCTTGGAAAGGGATCACATGTGAAGGTTCAGCCGTTGTTTCCATTGATCTCTCAGGTTTAGGACTCAATGGGACTCTAGGATACCTGCTTTCAGACCTTATGTCACTAAGAAAGCTTGACTTAAGTAACAACAAGATCCATGAGACAATTCCGTACCAGTTGCCACCGAATCTTACAAGCCTGAATCTTGCTAGAAATAACTTGAGTGGAAATCTTCCTTATTCCATTTCTGCCATGGCTAAGCTCAATTACCTGAATGTAAGCAGTAATGTGCTCTCCACATCAACTGGCGACATTTTTGCAAGTCTTTCTGATCTTGGTACCCTGGACCTATCATTCAATAACTTTTCTGGGGATCTTCCTCCTTCATTTGGTTCATTGTCCAATCTTTCTTCTCTCTTCTTGCAGAACAATCAATTGTCTGGCAACCTTAATACTCTTGTTGGTTTGCCCTTGGATACTTTAAATGTCGCACACAATAATTTCAGTGGATGGATACCTCGTGAGCTTAGTTCCATCCATAATTTCATATATGAGGGAAATTCTTTTGACAATGGTCCTGCTCCTCCTCCGCCACCTTTTACATCACCTTCTCCCAGTGGATCTCATAATAGTCATCGTCATTCTGGATCTGGATCACAAAATAAAACACGGGCTTCTGATAATGGAAGTTCTGATAGCAATAATGGCTTGACGACAGGGGCTGTAGTAGGCATTACTGTAGGTTCAGTGTTGGTTGCTGTTATTGTGCTACTTGCTCTTTTTTTCTGTATCCGGAAGCAAAAGGGGAAGGAAAAGGTTGCAAGAACTTCCAGTGGGAGCCTTCCTCTTGGAACTACTAATGTAACTCCTCAGATGCAAGAGCAGAGGGTAAAAAGTGCTGCTGTTATTACAGATCTGAAGCCTCCACCTGCAGAAAATGTGACGGTTGAGAGGGTGCCTGTGAAAAGTGGATCTATAAAGCAGATGAAGTCCCCTATAACTTCCACATCATACACAGTTGCTTCTCTCCAAAGTGCAACAAATAGCTTTAGTCAAGAGCATATTATTGGTGAAGGTTCTCTAGGCCGAGTTTACAAGGCTGAATTCCCAAATGGGAAGATCATGGCCATTAAGAAGATCGACAACTCAGCACTGTCATTACAGGAGGAAGACAATTTTCTTGAAGCTGTTTCAAATATGTCACGGCTACGGCACCCAAATATTGTTACAATGGCTGGATATTGTGCAGAGCATGGCCAGCGCCTTCTAGTTTATGAGTATATAGGAAATGGAAATCTGCATGACATGCTCCATTTTGCTGAAGATAGTAATAAGGCCCTATCTTGGAATGCCCGTGTACGCATAGCACTTGGCACAGCTCGGGCTTTAGAGTACTTGCATGAAGTGTGCTTGCCTTCTGTTGTACATAGAAATTTCAAATCTGCTAATATATTACTTGATGAGGAGCTCAATCCTCACCTGTCTGACTGTGGTTTAGCTGCTCTAACACCAAACACTGAGAGGCAGGTTTCAACTCAGATGGTCGGTTCATTTGGTTATAGTGCTCCTGAGTTTGCATTATCAGGAGTATACACCGTAAAAAGTGATGTTTACAGCTTTGGAGTGGTCATGCTGGAACTCTTGACTGGTCGGAAACCGCTCGACAGTTCGCGGGCTAGATCAGAGCAGTCACTTGTGAGATGGGCTACACCTCAGCTCCATGATATAGATGCCTTAGCCAAAATGGTTGATCCTGCTTTGAACGGCATGTATCCTGCAAAGTCACTTTCGCGCTTTGCTGACATCATTGCTCTATGTGTTCAGCCTGAACCGGAATTTCGACCTCCAATGTCTGAGGTGGTGCAAGCATTGGTACGGTTAGTGCAAAGAGCAAGTGTGGTTAAAAGGAGACCAAGTGAGGAATCTGGTTTTGGTCACAGGACCCCAGAACATGAGGCCATAGACATGTCTTTTTAA 2229 0.4401 MCLFLPEKPHPYSELRSCGGNNQTTMAHNMVLSLFVPFSLMILFFFSALPFALANTDPSDVQALGVLYNSLNSPSVLTGWKVGEGDPCGESWKGITCEGSAVVSIDLSGLGLNGTLGYLLSDLMSLRKLDLSNNKIHETIPYQLPPNLTSLNLARNNLSGNLPYSISAMAKLNYLNVSSNVLSTSTGDIFASLSDLGTLDLSFNNFSGDLPPSFGSLSNLSSLFLQNNQLSGNLNTLVGLPLDTLNVAHNNFSGWIPRELSSIHNFIYEGNSFDNGPAPPPPPFTSPSPSGSHNSHRHSGSGSQNKTRASDNGSSDSNNGLTTGAVVGITVGSVLVAVIVLLALFFCIRKQKGKEKVARTSSGSLPLGTTNVTPQMQEQRVKSAAVITDLKPPPAENVTVERVPVKSGSIKQMKSPITSTSYTVASLQSATNSFSQEHIIGEGSLGRVYKAEFPNGKIMAIKKIDNSALSLQEEDNFLEAVSNMSRLRHPNIVTMAGYCAEHGQRLLVYEYIGNGNLHDMLHFAEDSNKALSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGVYTVKSDVYSFGVVMLELLTGRKPLDSSRARSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSEESGFGHRTPEHEAIDMSF* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0886 742 SUPERFAMILY Protein kinase-like (PK-like) 411 708 IPR011009 -
Dod03g0886 742 Pfam Leucine rich repeat N-terminal domain 58 97 IPR013210 -
Dod03g0886 742 Pfam Leucine rich repeat 146 206 IPR001611 GO:0005515
Dod03g0886 742 CDD STKc_IRAK 440 711 - -
Dod03g0886 742 ProSiteProfiles Leucine-rich repeat profile. 125 146 IPR001611 GO:0005515
Dod03g0886 742 SUPERFAMILY L domain-like 57 265 - -
Dod03g0886 742 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8 54 738 - -
Dod03g0886 742 ProSiteProfiles Protein kinase domain profile. 434 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0886 742 Gene3D Transferase(Phosphotransferase) domain 1 512 721 - -
Dod03g0886 742 Gene3D Phosphorylase Kinase; domain 1 397 511 - -
Dod03g0886 742 PANTHER OS01G0253100 PROTEIN 54 738 IPR045271 GO:0004714|GO:0006468
Dod03g0886 742 MobiDBLite consensus disorder prediction 272 318 - -
Dod03g0886 742 Pfam Protein kinase domain 435 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0886 742 Gene3D Ribonuclease Inhibitor 57 299 IPR032675 -
Dod03g0886 742 MobiDBLite consensus disorder prediction 289 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0886 Dod-Chr3 10895912 10901843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0886 169 742 Strubbelig Receptor Gene Family AT4G22130 71.750 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Dod03g0886 Pkinase 5.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0886 - - aprc:113869285 1139.02