Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0883 ATGACCACAAAACCAAACAGAAAACCACCCCATGCTTTCTTGATTCTCCTTCTCTTTCTCTTGTTGCTTATTATCGTCACCAAAAAAGCTCAAGCTAGGTGCAGTTCTGGCTGCAACCTCGCACTTGCTTCCTATTACGTGTGGCAAGGCACAAACCTCACTTACATCAGCAACATCTTCGGGAAACCCACATCGGAGATTCTCAAGTACAACCCAAGCATCAAAAACGCGGATTCCATCCAGAGCCAAACAAGGATCAACGTGCCTTTCTCGTGTGAATGCTTGAACGGTGTCTTTTTGGGACACACTTTCTCTTACACGACACAACACGGCGACACGTACAACGTTATTGCTGAGGTTGCTTTCTCAAACCTCACCACTGAGGAGTGGGTGAGCAGGGTGAACAGCTATGCACCCACTCAGATACCTGAAAACATGAAGATCAATGTCACTATAAACTGCTCCTGCGGTGATAAACGCCTGTCCAAGGATTATGGTTTGTTTGCGACGTATCCGCTAAGGATCGGAGAGAGCTTGCCAGGGGTTGCGGCGGAATCCGATGTGCCGGCGGAGCTGCTGCAGAGGTACAACCTAGGGTCGGATTTCGGTGCTGGGCATGGGATTGTGTTTGTGCCGGCCAAAGGAATATCTGGTGGAGCCATTGCTGGCATAGTTGTTGGAGGAGCTGTTGGGATATTGCTATTATTACTGGCACTTGTTCTATATGTTGCGCTGCATAGAAGAAAGAAAGTAGCTGAGGTGTCCCTTCTCCCAGTCCCAGGAGCTTCTGAAGATCAACATAGTTGTGGAAGCAGCTTGGATAAAGCCGCATCAGAGTCATCTATTGTTGTTTCACCAAGGTTGACCGGTATTACAGTGGACAAGTCGGTGGAGTTCTCATATGAGGAGCTAGCCAAGGCTTCCAATGGCTTTAGCATAGCTAATAAAATTGGTCAAGGTGGCTTTGGATCTGTATACTATGCAGAGCTTAGAGATGAGAAAGCAGCAATTAAGAAAATGGACATGCAAGCATCAAAAGAATTCCTTGCTGAACTGAAAGTTCTAACACACGTCCATCACTTGAACTTGGTGCGGTTAATAGGATACTGTGTTGAGGGCTCCTTATTTTTAGTTTATGAATACATTGAGAACGGCAATTTAAGCCAACATTTGCGTGGTTCAGGGAGGGATCTGTTATCATGGCCAAATAGAGTTCAAATTGCCCTTGATGCAGCAAGAGGACTAGAATACATCCACGAGCATACAGTTCCTGTCTACATTCATCGAGATATAAAGTCAGCAAACATTTTGATAGACAAAAACTTCCGTGGAAAGGTTGCAGACTTTGGTCTGACAAAATTGACTGAATATGGTAGTTGTTCATTACAAACACGTCTTGTGGGTACATTTGGCTATATGCCTCCAGAATATGCAAGGTATGGTGAAGTCTCCCCAAAAATAGATGTATATGCTTTTGGAGTTGTTCTCTATGAACTAGTATCCGGCAAGGAAGCTATTATCAAGACAAATGAGATTGTAAATGAGTCAAAAGGACTAGTTGCCTTGTTTGAAGAGGTTCTTAGTTTGCCAGACCCAAAGGAAGATCTTCCGAAACTTGTTGACCCTAGGCTTGGAGACAACTACCCTATTGACTCAGTATTTAAGATGTGTCAGCTTGCCAGAGGTTGCACACATGAAAACCCTCAACTTAGGCCAAGCATGAGATCTATTGTAGTTGCCTTAATGACACTTTCATCAGCAAACGAGGATTGGGATGTTGGTTCTTTCTACGAGAACCAAGCATTAGTGCATCTAATGTCAGGAAGCTTGTATTCAGTATTCACTTTGGTAACAATGGATTTTGTAACTTCAAGACGAGAAAATTCAAAGCAGAAGCACACTGATGGTAATCCTCCGGTCTCAAGTTGCTCAGGAGCTTTTGGAACTTCAAAAAGAAAGGCTCAAGAGATTCATAAACATGATGATAAAAGGCTAAATTCAGAAGGGGAACGAGACATTATGTTATGTTCAAAGGCAACTACTAAACTTCCATCAAGGAAAAGACATAAGCCAAATATGTGTCTTAGCACCTCGAGCAAGAAAAAAAAAAATGAAGACAATCACTTGATCAACAAATTGGAAGAAGATGAAGAAGTTGTCTTCGTCACAAAGACAAAGTCCAGAAGCAAAGCTGGAGAGATGGATAATAATATGGACATTGGACAAAATTACCGAATATGTCATCAGTGCTTGAAAAAGGAAAGAGCAGCATTTGTACCTTGCACTAAATGTCAGAAGATGTACTGTGCACGATGCATCAAGCAATGGTATCCCAATATGTCAGTGGAATATATGGCTGGGAGGTGCCCTTTTTGCCGCAAAAACTGCAATTGCAATGTTTGCTTGCGTTCAAGGGGAACCATTAAGACATCTACCAGGGACATCACAGATAATGAAAAAGTTCAGTACCTGCAGTACACAATTAACTTACTCCTTCCATTTATGAAACAAATCTGTGAAGAACAAAGTAAAGAGCTACAGATTGAAGCTAAAATACAAGGAAAACCATGCTCTCAGCTTGAGATTCCACAAACCCCTTGTGGTGACGATGAGCGTATCTACTGTGACCATTGTGCTACTTCAATTATTGATCTTCATCGAAGCTGCCCAAAGTGTTCCTTTGAAATCTGCCTTAGTTGCTGCCAAGAAATACGCAATGGGAGCATTTTACCCCGGTCTGAACTGAAGTTCCAATATCTGAACAAGGGCTATGATTATATGCATGGAGGTGACCCCCTACCAATGTCTTGTAATTTAGGGACTTCAGAGGGTCATATTAAGGTATCTACCATATGGACTGCCAACAGTGATGGAAGTGTTAGATGTGCTCCAAAAGAATTTGGAGGTTGTGGCCACTCTATGTTGGAGCTGAAGCACATGCTTCCACATGGCTGGATATCTAACTTGGAAGCCAAAGCTCGTGACATAATGAAAAACTTCTGCGGGATTGAACATACAAATCTTCACAAAGAAGCAGCACCAAGCAGCAACTCTATGATAAGAGCAGCTTCTAGAGATGGCACGAATGACAATAACATATACTGTCCAGCATCAAGTGACATCTTAAAGGAAGGGCTGTTTCTCTTCCAAAAGCATTGGACTAATGGCGAGCCAATTATAGTTCGTGATGTTCTCAAGCAAGGGACAGGTTTAAGTTGGGAGCCAATGGTTACATGGAGAGCACTATCTGAAAATTTGGGTTCCAAGATCAGCTCGAGTATGTCACAAGTGAAGGCCATTGATTGCCTGGCAAGTTGTGAGGTAGAAATTAACACTCGTATGTTCTTTAAGGGCTATAAAGAGGGAAGAAGCTATGGCAATCTCTGGCCAGAGATGCTCAAGCTCAAAGACTGGCCCCCATCTGAAAAGTTTGAAGATCTTCTGCCACGCCATTGTGATGAGTTTATCCGTTGCTTACCATTTCAAGAGTATACTGATCCTCGAGCTGGAGTCCTCAACCTTGCTGTGAAGCTGCCAGCACATGTCCTAAAACCTGACATGGGTCCAAAAACGTATATTGCTTATGGGGTGAAAGAAGAACTTGGCAGAGGAGATTCAGTGACAAATCTTCACTGTGACATGTCAGATGCAGTGAACATTTTGACCCATACAGCTGAGGTGAAATTAACTGATGAACAGAACTATGTCATCTCAAACTTGAAAAAAGCACACAAGGCCCAAGATGAGAAAGAGCTCCTTGGTCATGTGAGGGTTGATGAATGCCCGAATGGAGGACCTTGCAAAGGTAGCAGAGAACAGAAAAAAGATGATGAGAATTGCCATGATGAGATCAATGGAAAGATTTTTCCAATTGGGGTGCCCAGCATCTCTGAAGAAACCAAGGAAACAGGTGGTGCTCTTTGGGACATATTTCGGAGAGAGGACACTGAAAAGTTAGGAGCATATCTAATAAAACACTCCAAAGAATTCAGGCATACTTATTGTTCTCCAGTTGAACAGGTTTTCCATCCAATTCATGACCAGTGTTTTTATTTGACTTTGGAGCACAAGAAGAAGCTGAAAGAGGAATTTGGTGTAGAACCATGGACTTTTGAGCAGAAACTTGGGGAGGCAGTATTTATTCCTGCCGGATGCCCACATCAAGTCAGGAATCTCAAGTCATGCACAAAAGTTGCTGCAGATTTTGTGTCCCCAGAAAATGTACATATGTGCCTGCGTTTAACAGATGAGTTCCGTCGTCTTCCTAAGAATCACAAGGCCAGAGAAGATAAACTTGAGATAAAGAAGATGATAGTCTATGCTGCTGACCAAGCTGTCAAAGATTTAGAAGGTTTAGTTAGGTGTTCTTCACTCGCTTAA 4380 0.4276 MTTKPNRKPPHAFLILLLFLLLLIIVTKKAQARCSSGCNLALASYYVWQGTNLTYISNIFGKPTSEILKYNPSIKNADSIQSQTRINVPFSCECLNGVFLGHTFSYTTQHGDTYNVIAEVAFSNLTTEEWVSRVNSYAPTQIPENMKINVTINCSCGDKRLSKDYGLFATYPLRIGESLPGVAAESDVPAELLQRYNLGSDFGAGHGIVFVPAKGISGGAIAGIVVGGAVGILLLLLALVLYVALHRRKKVAEVSLLPVPGASEDQHSCGSSLDKAASESSIVVSPRLTGITVDKSVEFSYEELAKASNGFSIANKIGQGGFGSVYYAELRDEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGSGRDLLSWPNRVQIALDAARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLTKLTEYGSCSLQTRLVGTFGYMPPEYARYGEVSPKIDVYAFGVVLYELVSGKEAIIKTNEIVNESKGLVALFEEVLSLPDPKEDLPKLVDPRLGDNYPIDSVFKMCQLARGCTHENPQLRPSMRSIVVALMTLSSANEDWDVGSFYENQALVHLMSGSLYSVFTLVTMDFVTSRRENSKQKHTDGNPPVSSCSGAFGTSKRKAQEIHKHDDKRLNSEGERDIMLCSKATTKLPSRKRHKPNMCLSTSSKKKKNEDNHLINKLEEDEEVVFVTKTKSRSKAGEMDNNMDIGQNYRICHQCLKKERAAFVPCTKCQKMYCARCIKQWYPNMSVEYMAGRCPFCRKNCNCNVCLRSRGTIKTSTRDITDNEKVQYLQYTINLLLPFMKQICEEQSKELQIEAKIQGKPCSQLEIPQTPCGDDERIYCDHCATSIIDLHRSCPKCSFEICLSCCQEIRNGSILPRSELKFQYLNKGYDYMHGGDPLPMSCNLGTSEGHIKVSTIWTANSDGSVRCAPKEFGGCGHSMLELKHMLPHGWISNLEAKARDIMKNFCGIEHTNLHKEAAPSSNSMIRAASRDGTNDNNIYCPASSDILKEGLFLFQKHWTNGEPIIVRDVLKQGTGLSWEPMVTWRALSENLGSKISSSMSQVKAIDCLASCEVEINTRMFFKGYKEGRSYGNLWPEMLKLKDWPPSEKFEDLLPRHCDEFIRCLPFQEYTDPRAGVLNLAVKLPAHVLKPDMGPKTYIAYGVKEELGRGDSVTNLHCDMSDAVNILTHTAEVKLTDEQNYVISNLKKAHKAQDEKELLGHVRVDECPNGGPCKGSREQKKDDENCHDEINGKIFPIGVPSISEETKETGGALWDIFRREDTEKLGAYLIKHSKEFRHTYCSPVEQVFHPIHDQCFYLTLEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAADFVSPENVHMCLRLTDEFRRLPKNHKAREDKLEIKKMIVYAADQAVKDLEGLVRCSSLA* 1460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0883 1459 CDD STKc_IRAK 317 578 - -
Dod03g0883 1459 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 644 1456 IPR045109 GO:0032454|GO:0033169
Dod03g0883 1459 ProSiteProfiles JmjC domain profile. 1167 1419 IPR003347 -
Dod03g0883 1459 SMART cupin_9 1148 1419 IPR003347 -
Dod03g0883 1459 Pfam JmjC domain, hydroxylase 1298 1402 IPR003347 -
Dod03g0883 1459 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524
Dod03g0883 1459 ProSiteProfiles LysM domain profile. 43 88 IPR018392 -
Dod03g0883 1459 SUPERFAMILY Protein kinase-like (PK-like) 291 581 IPR011009 -
Dod03g0883 1459 ProSiteProfiles Protein kinase domain profile. 311 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0883 1459 MobiDBLite consensus disorder prediction 627 664 - -
Dod03g0883 1459 Gene3D Phosphorylase Kinase; domain 1 296 381 - -
Dod03g0883 1459 SMART serkin_6 311 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0883 1459 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 744 812 IPR018866 -
Dod03g0883 1459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Dod03g0883 1459 Pfam Protein tyrosine and serine/threonine kinase 313 579 IPR001245 GO:0004672|GO:0006468
Dod03g0883 1459 ProSiteProfiles Zinc finger RING-type profile. 747 793 IPR001841 -
Dod03g0883 1459 MobiDBLite consensus disorder prediction 634 649 - -
Dod03g0883 1459 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN PROTEIN 644 1456 - -
Dod03g0883 1459 Gene3D Cupin 1030 1428 - -
Dod03g0883 1459 Gene3D Transferase(Phosphotransferase) domain 1 382 593 - -
Dod03g0883 1459 SUPERFAMILY Clavaminate synthase-like 1050 1449 - -
Dod03g0883 1459 SMART LysM_2 44 89 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0883 Dod-Chr3 10826903 10843565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0883 15 608 Receptor kinase-like Gene Family AT3G21630 55.429 0.0 662
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dod03g0883 PK_Tyr_Ser-Thr 1.8e-44 CL0016
TR Jumonji Dod03g0883 PK_Tyr_Ser-Thr 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0883 K15601 - gmx:100801772 1208.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0883 03 10826903 10843565 Dod03g0883 03 10826903 10843565 ECH