Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0870 ATGGACAAAGGATGGGGTCTCGCCCTTGATTCTTGTCCGTCTCCTACTCTTCCATTCTTCCATCCTTCTTCAAGCAAGCAGCCACATACTACTTCTGTGAAACCTTTCACTCACCTCGATACAAGGATGTTCCCTCTCTTGGGATTCCCCGTTAACCTTACCCGTCCCAACAACAACAAAGAAGAACAGCAAGACCATGCCGCTCATCATGATGATGATAACAACAACAACAACAACCACACGGTTGTCAGTGTAGTCGACTTCTTCTCTGACAGGAACAAGAGGACATCACCTCCACCACCACCACTTGGACACGACCATGATCATGATCATCACCGGCGTCATGTTAAGCCCAACATCATCTCCGTCAAGAAGGAGCTGATTCCTCACGACAATGAAACACCCCCCAACGTTAATACTGGTTTGCAACTCCTTACTGCCAACACTGGGAGTGATCAATCTACGGTGGATGATGGTGTTTTATCATCAGATGCTGAAGATAAGAGAGCCAAGTCCACTGAGCTTGCAATGTTGCAAGTGGAGCTCCAACGCATGAATGCCGAGAACCAGAAGCTGAAAGAGATGCTGAGCCATGTGAGCGGTAATTACACGGCCTTGCAAATGCATCTTGCCACATTAATGCAACACCAACAGAACCACCGCACCGAGAGCACAGAAAATGAGGTTGTTCAGGGAAAAGGTGAGGAGAAAAAACCGGATGTTAGTGGAGTAATGGCACCAAGACAGTTCCTCGATTTAGTTGCTGCTGGCACAGCCGAAGTAGATGATCAAGTATCCAATTCTTCTTCTGAAGAAAGGACACGATCGAGCACACCTCAGAACAATAACAATGAAGCTGGAACAAGAGATCACGTCAGGAACAACAATGGTAAAAATGAGATGGGTCGGGAAGAGAGTCCAGACTCAGAATCACAAGGTTGGCGGGCTCCCAACAAGCAGCAAAAACTGAACCCCTCCAACACTATGGATCAGTCCACTACAGAAGCCACAATGAGAAAAGCCCGTGTCTCAGTTCGTGCTCGATCAGAAGCTCCTATGATCAGTGATGGGTGCCAGTGGCGAAAGTATGGACAAAAAATGGCTAAAGGAAATCCATGTCCTAGAGCATATTACAGATGCACTATGGCAGTTGGTTGCCCAGTTCGCAAACAAGTTCAACGTTGTGCTGAGGACAGGACCATTTTGATAACTACTTATGAAGGCACACACAACCATCCACTGCCACCAGCTGCTATGGCAATGGCATCGACCACCGCAGCTGCTGCTAGCATGTTGCTGTCAGGTTCAATGTCAAGTGCAGATGGGATAATGAACCCAAATTTGCTAGCAAGAGCTATTCTCCCATGCTCATCTAGCATGGCAACGCTCTCAGCATCAGCACCATTCCCAACCGTGACATTGGACCTCACACACAACCCAACAAGTACAAATCCATTGCAGGCTCAAATGAGGCCTCCTCATCATCCTGCCCCATTATTCCAGATACCTAATTTCCATGGGCAGCCCCAGAACATTGGGTCAGGATCAGGATCAGGAGGAGCCACTAATAATACTGCTACTGCTCCATTTGCTCAAGCACTCTATAACCAATCAAGATTCTCTGGTCTCCAGTTGTCTCAAGAAGCCGGGTCTTCACAATTGGCACTACAAGCTTCAAGGCCACCTTTGCAGCAAAGCCAACAACAACAGCCCTCACTGGCTGATACGGTCACCGCAGCCATCACCACCGACCCTAACTTCACGGCCGTGCTTGCCGCCGCCATCTCCTCCATCATCGGCGGTGGTGCTCATTCAAACAACAACGACAACAACAACGACAATACCAATTCCAATGTCAACAACAGGAGCACAACTATTAGCAGCTTTTCACGAAACTAG 1899 0.4818 MDKGWGLALDSCPSPTLPFFHPSSSKQPHTTSVKPFTHLDTRMFPLLGFPVNLTRPNNNKEEQQDHAAHHDDDNNNNNNHTVVSVVDFFSDRNKRTSPPPPPLGHDHDHDHHRRHVKPNIISVKKELIPHDNETPPNVNTGLQLLTANTGSDQSTVDDGVLSSDAEDKRAKSTELAMLQVELQRMNAENQKLKEMLSHVSGNYTALQMHLATLMQHQQNHRTESTENEVVQGKGEEKKPDVSGVMAPRQFLDLVAAGTAEVDDQVSNSSSEERTRSSTPQNNNNEAGTRDHVRNNNGKNEMGREESPDSESQGWRAPNKQQKLNPSNTMDQSTTEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGTHNHPLPPAAMAMASTTAAAASMLLSGSMSSADGIMNPNLLARAILPCSSSMATLSASAPFPTVTLDLTHNPTSTNPLQAQMRPPHHPAPLFQIPNFHGQPQNIGSGSGSGGATNNTATAPFAQALYNQSRFSGLQLSQEAGSSQLALQASRPPLQQSQQQQPSLADTVTAAITTDPNFTAVLAAAISSIIGGGAHSNNNDNNNDNTNSNVNNRSTTISSFSRN* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0870 632 MobiDBLite consensus disorder prediction 149 168 - -
Dod03g0870 632 Gene3D WRKY domain 339 416 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod03g0870 632 Coils Coil 168 202 - -
Dod03g0870 632 MobiDBLite consensus disorder prediction 221 242 - -
Dod03g0870 632 Pfam WRKY DNA -binding domain 356 413 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod03g0870 632 MobiDBLite consensus disorder prediction 552 571 - -
Dod03g0870 632 ProSiteProfiles WRKY domain profile. 349 415 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod03g0870 632 MobiDBLite consensus disorder prediction 291 310 - -
Dod03g0870 632 SMART WRKY_cls 354 414 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod03g0870 632 MobiDBLite consensus disorder prediction 506 525 - -
Dod03g0870 632 MobiDBLite consensus disorder prediction 215 244 - -
Dod03g0870 632 MobiDBLite consensus disorder prediction 311 339 - -
Dod03g0870 632 MobiDBLite consensus disorder prediction 50 113 - -
Dod03g0870 632 SUPERFAMILY WRKY DNA-binding domain 347 415 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod03g0870 632 MobiDBLite consensus disorder prediction 261 290 - -
Dod03g0870 632 MobiDBLite consensus disorder prediction 259 341 - -
Dod03g0870 632 MobiDBLite consensus disorder prediction 606 632 - -
Dod03g0870 632 PANTHER WRKY TRANSCRIPTION FACTOR 6 68 613 - -
Dod03g0870 632 MobiDBLite consensus disorder prediction 59 76 - -
Dod03g0870 632 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 68 613 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0870 Dod-Chr3 10739177 10742020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0870 1 611 WRKY Transcription Factor Family AT1G62300 49.379 1.80e-149 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod03g0870 WRKY 6.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0870 - - gmx:100802124 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0870 03 10739177 10742020 Dod03g0870 03 10739177 10742020 ECH
Dod08g0258 08 2798319 2801647 Dod03g0870 03 10739177 10742020 ECH
Dod03g2270 03 53048635 53052137 Dod03g0870 03 10739177 10742020 ECH