Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0868 ATGGAATGGACAAGGGGTCACACCCTCGGCCGTGGTTCCACTGCCGCGGTCTACATCGCTGAGTCTCGTCAATCCGGTGAAGTTTTTGCCGTTAAGTCTGCGGAGCTCCACCGGTCTGATGGACTCAAGAAAGAACGAGGGATTCTTTCAACACTGAATTGTCCTCAAATTGTGACATACCGAGGTTACGATGTCACATACGAGAATGGGGCACACTGGTACAACCTCTTCATGGAGTACGCGCCACATGGGACGCTATTAGACCACGACGGTCGAATGGAAGAGCCATTGGCGGGGTTCTACACGCGCCAGATTCTACTTGGCTTGAACTATCTCCATGCCAACGGGATAGTGCATTGCGATGTTAAGGGACAGAACGTGCTGGTCACGCGCCGGGGTGCGAAGATTGCGGACTTGGGTTGCGCAAAGAGGGTTGCTTCCTACGGTGACGGAGGGGTCATCGCCGGAACTCCAGCGTTCATGGCGCCGGAGGTGGCGCGTGGGGATGAGCAGCGGTTCCCTGCCGACGTGTGGGCTCTGGGGTGCACCGTTCTCGAGATGATCACAGGGAACTCACCGTGGCAAGGTGAACCCGACCCGGTTTCGGTGCTTTATCGGGTCGGGTTCTCCGGTGAGGCACCGGAGGTTCCGAGTTTTGTTTCGGAGCAAGGGAAGGACTTCTTGAGCAAGTGCTTGAGGAGGGAACCGAGTGAGAGGTGGACGGTGGAGGAGCTTCTGGGACACGCGTTTGTTGCGGAATCGCGTTCGGAGGGAAAGGAATTATTTGCGTTTGGAAAAATGAGGTGTGGTGACTCGGACACTCCCACGAGTGTTTTGGGACGACGGTTTTGGGACTCGGTGGAGACCAATCGGAATTCGACACGTGGTGGATGTTGTTCCTCGGATTCTCCGAGTGCTAGGGACAGAGTTCGTAGGTTGTGTGGTGGTATTGGTAAGCCCGTTTGGGCATTATGGGGTGATGATGATGATGATGAGAAGTGGATCACGGTCAGAAGCAATGGGGAGGGTGGTTTTATTGAGGAAACGGAGGATTGTGGATCAGATAACACCGTTTGCATCCTTAGAGAAGACAATTGTTTGGTTATTTTTTATGAACCAAAAGTTGTGGTAGTTGATAATGCAACTCAATTGTGTAGATGGAATGTTGTTACTGATGATTTTTACCTTTGCAGCGGTGGTTGTGGCCGTTGCGATGGAGATTCTTTGTTTTTAGGTTGTTCATGTTTAAAGATTGGTACCCATATGGGAACTTTGATTATCAGATCAAGGAATTTTTTTTATCAAGCCATGACTTTTCTGCCTTCTTCTATTTCCCTCTTTAATTCCACTTTGGATGATTTGGAAGCTTTACAATTTGAAACTGAAAGTACTCCAATGGATAACGTGTGCCCATCATTATGGGCTAAATTCAATGCTATCCATAACTACAGCTCGCTCCTATGTTTTAGATTACACTTTAACGAACACAATGCATAG 1497 0.4963 MEWTRGHTLGRGSTAAVYIAESRQSGEVFAVKSAELHRSDGLKKERGILSTLNCPQIVTYRGYDVTYENGAHWYNLFMEYAPHGTLLDHDGRMEEPLAGFYTRQILLGLNYLHANGIVHCDVKGQNVLVTRRGAKIADLGCAKRVASYGDGGVIAGTPAFMAPEVARGDEQRFPADVWALGCTVLEMITGNSPWQGEPDPVSVLYRVGFSGEAPEVPSFVSEQGKDFLSKCLRREPSERWTVEELLGHAFVAESRSEGKELFAFGKMRCGDSDTPTSVLGRRFWDSVETNRNSTRGGCCSSDSPSARDRVRRLCGGIGKPVWALWGDDDDDEKWITVRSNGEGGFIEETEDCGSDNTVCILREDNCLVIFYEPKVVVVDNATQLCRWNVVTDDFYLCSGGCGRCDGDSLFLGCSCLKIGTHMGTLIIRSRNFFYQAMTFLPSSISLFNSTLDDLEALQFETESTPMDNVCPSLWAKFNAIHNYSSLLCFRLHFNEHNA* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0868 498 Gene3D Transferase(Phosphotransferase) domain 1 2 278 - -
Dod03g0868 498 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 363 - -
Dod03g0868 498 Pfam Protein kinase domain 4 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0868 498 SUPERFAMILY Protein kinase-like (PK-like) 3 252 IPR011009 -
Dod03g0868 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Dod03g0868 498 CDD STKc_MAPKKK 2 251 - -
Dod03g0868 498 PANTHER MAP KINASE KINASE KINASE 1 363 - -
Dod03g0868 498 ProSiteProfiles Protein kinase domain profile. 3 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0868 498 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Dod03g0868 498 SMART serkin_6 3 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0868 Dod-Chr3 10720328 10721963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0868 3 352 MAP Kinase Kinase Kinase AT5G55090 47.411 4.93e-102 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod03g0868 Pkinase 7.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0868 K20716 - gmx:100802174 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0868 03 10720328 10721963 Dod03g0868 03 10720328 10721963 ECH