Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0853 ATGGCTGAGGCTGCACAACCCAATGCTGAGTTGTTGGAATGGCCAAAGAAAGATAGGCGCCGCTTCCTGCATGCTGTGTACCGTGTTGGTGACCTTGATCGCACCATCAAGTTTTATACTGAGGCTTTTGGAATGAAGCTTTTGAGGAAAAGGGATGTTCCGGAGGAGAAGTATGCCAATGCTTTTCTTGGATTTGGCCCTGAACATTCCCATTTTGTTGTGGAATTGACATATAACTATGGAGTGACCTCGTATGATATTGGAACTGGCTTTGGACATTTTGCTATTGCAACTCCAGATGTTTATAAATTGGTTGAAGACATCAGGGCAAAGGGTGGGACCGTGACTAGGGAGCCTGGTCCTGTTAAAGGCGGGTCATCTGTCATCGCCTTTGTGAAGGATCCTGATGGTTACATATTTGAGCTTATCCAAAGACCTTCAACCCCTGAGCCATTATGTCAAGTAATGCTTCGTGTTGGTGATTTAGAGCGCTCAATTAAGTTTTATGAAAAGGTAACTGTTAATGTCATTTTTTTTCTTTTAATGAGCAAGCATTTTAATTACACCATAGCTATGCTTGGGTATGCAGAGGAGCATGAGACAACTGTGTTGGAGTTGACATATAACTACGGTGTCACTGAATACACCAAGGGAAATGCTTATGCTCAGGTTGCTATTGGGACTGATGATGTATACAAGAGCGCAGAGGTGATCAACATAGTCACACAAGAGCTTGGAGGAAAGATTACTCGGCAACCAGGGCCAATTCCCGGCATTAACACCAAGATTGTTTCTTTCTTAGATCCTGATGGATGGAAAACTGTCTTGGTTGACAATGAAGATTTTCTGAAGGAACTGGAATGA 864 0.4306 MAEAAQPNAELLEWPKKDRRRFLHAVYRVGDLDRTIKFYTEAFGMKLLRKRDVPEEKYANAFLGFGPEHSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKLVEDIRAKGGTVTREPGPVKGGSSVIAFVKDPDGYIFELIQRPSTPEPLCQVMLRVGDLERSIKFYEKVTVNVIFFLLMSKHFNYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVINIVTQELGGKITRQPGPIPGINTKIVSFLDPDGWKTVLVDNEDFLKELE* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0853 287 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 154 273 IPR004360 -
Dod03g0853 287 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 23 142 IPR004360 -
Dod03g0853 287 PANTHER LACTOYLGLUTATHIONE LYASE 11 287 - -
Dod03g0853 287 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 152 278 IPR029068 -
Dod03g0853 287 ProSitePatterns Glyoxalase I signature 2. 88 100 IPR018146 GO:0004462|GO:0046872
Dod03g0853 287 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 11 287 - -
Dod03g0853 287 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 20 172 IPR029068 -
Dod03g0853 287 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 151 279 IPR037523 -
Dod03g0853 287 Gene3D - 1 147 IPR029068 -
Dod03g0853 287 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 21 145 IPR037523 -
Dod03g0853 287 Gene3D - 148 287 IPR029068 -
Dod03g0853 287 TIGRFAM glyox_I: lactoylglutathione lyase 9 154 IPR004361 GO:0004462|GO:0046872
Dod03g0853 287 CDD GlxI_Ni 23 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0853 Dod-Chr3 10570576 10574212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0853 24 143 Calmodulin-binding Proteins AT1G08110 29.655 9.31e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0853 K01759 - gmx:100799447 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0853 03 10570576 10574212 Dod03g0853 03 10570576 10574212 ECH
Dod03g0377 03 4471701 4475347 Dod03g0853 03 10570576 10574212 ECH
Dod05g2842 05 54363440 54366370 Dod03g0853 03 10570576 10574212 PCT