Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0843 ATGAGTGTTTCAGATCAAGCAACGGATGATGCAACCACTACCAATAACATGGCCCACTATGTCCAAGAGATGAAGCATGAGGAGCGTATGCTGGAATTCTCAGAAGACGAGGAAGATCTCTTTGCTAGGATGTTTAGATTGGTCGGAAAAAGGTGGTCTCTTATTGCTGGGAGAATACCCGGAAGGACTGCAGAAGAGGTTGAAAAGTATTGGACTTCAAAATACGCTTTACCCAGTGAACAGTACTCTTCTTCTGCAATAGGGCATGCATCTTAG 276 0.442 MSVSDQATDDATTTNNMAHYVQEMKHEERMLEFSEDEEDLFARMFRLVGKRWSLIAGRIPGRTAEEVEKYWTSKYALPSEQYSSSAIGHAS* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0843 91 CDD SANT 32 71 IPR001005 -
Dod03g0843 91 Pfam Myb-like DNA-binding domain 32 72 IPR001005 -
Dod03g0843 91 Coils Coil 17 37 - -
Dod03g0843 91 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 3 77 - -
Dod03g0843 91 Gene3D - 32 87 - -
Dod03g0843 91 SUPERFAMILY Homeodomain-like 33 74 IPR009057 -
Dod03g0843 91 PANTHER AND CPC, PUTATIVE-RELATED 3 77 - -
Dod03g0843 91 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 80 IPR017930 -
Dod03g0843 91 ProSiteProfiles Myb-like domain profile. 25 75 IPR001005 -
Dod03g0843 91 SMART sant 29 77 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0843 Dod-Chr3 10401244 10402595 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0843 33 73 MYB Transcription Factor Family AT3G13540 60.976 4.47e-14 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod03g0843 Myb_DNA-binding 7.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0843 - - adu:107482590 110.153