Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0840 ATGGCCAACCATTTTTCGGTCACTGAAAGATTTTATGCATGCCTTGAAATTCATGCTACTTTGGTGGTTTTGCTGGCCTTATTATGTGAAGGCACATCAGGGCTAACAGAAGCTGAGGCCCTGATCAGGTGGAAAGAAAGTCTCCCGGACCAATCAATTTTGGACTCATGGGTCTTTCCAGGACGGACCGACAACACCAGTGCAACTCAAAGCCCATGTTCATGGCGAGGTATCACTTGTGATTCTCGAGGCAGAGTGAGTGCTATAAACTTGGCATACACTGGACTTGCAGGAATATTAGACCCCCGTTTATTTCCTGATGGAAGTGATCAGCCAAAAACTGGCCTCATCAGTATTAGGAATCTCCTGTGCCAAAAGACCCTGCTAGGTGGCAGAATTCCAAATGAAATAGGCAACATAAGAAACTTGACTTTGTTATCTCTTGATGAGAACTACTTTTATGGGCCTATTCCCCCATCTCTGGGAAACTGTACACATTTAAGCATTCTCACAATGTATCAAAACCATCTCTCAGGCACATATGGCTATGCAGCTCCAGAGCTTGCTTACACAATGGCAGTGACTGAGAAATGTGATGTGTTCAGCTTTGGTGTTTTGGCTTTAGAAGTTCTTATGGTAAAGCACCCCGGTGATCTTGTTTCTTATACACAACAGACTTCTAGTGGTTCAAAGATAAACTTCAATGAGATTTTAGGCCCACGCCTCTCACCTCCAGCAAATAAACATACTTTGAAGGAATTGGGATTGATTGCCAGTCTAAGTTTTTCATGTTTGCAAACAAACCCTCAATCTCGACCGACCATGCGAAGCATAGATCACTGGCTTGGAATGGAGCCAGCAAATAACTTGTGA 873 0.4364 MANHFSVTERFYACLEIHATLVVLLALLCEGTSGLTEAEALIRWKESLPDQSILDSWVFPGRTDNTSATQSPCSWRGITCDSRGRVSAINLAYTGLAGILDPRLFPDGSDQPKTGLISIRNLLCQKTLLGGRIPNEIGNIRNLTLLSLDENYFYGPIPPSLGNCTHLSILTMYQNHLSGTYGYAAPELAYTMAVTEKCDVFSFGVLALEVLMVKHPGDLVSYTQQTSSGSKINFNEILGPRLSPPANKHTLKELGLIASLSFSCLQTNPQSRPTMRSIDHWLGMEPANNL* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0840 290 SUPERFAMILY Protein kinase-like (PK-like) 172 280 IPR011009 -
Dod03g0840 290 Pfam Leucine rich repeat N-terminal domain 36 81 IPR013210 -
Dod03g0840 290 Pfam Protein kinase domain 174 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0840 290 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 10 101 - -
Dod03g0840 290 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 177 285 - -
Dod03g0840 290 Gene3D Transferase(Phosphotransferase) domain 1 161 285 - -
Dod03g0840 290 SUPERFAMILY L domain-like 63 180 - -
Dod03g0840 290 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 177 285 - -
Dod03g0840 290 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 105 179 - -
Dod03g0840 290 Gene3D Ribonuclease Inhibitor 32 110 IPR032675 -
Dod03g0840 290 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 105 179 - -
Dod03g0840 290 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 10 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0840 Dod-Chr3 10367142 10370310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0840 24 181 Receptor kinase-like Gene Family AT5G16000 33.735 2.89e-17 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod03g0840 Pkinase 9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0840 - - vra:106755854 158.303