Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0833 ATGATGCAGCCAGGACCTGGAATGGCTCCACCCAACATGGGCCAGCAGCCACCGCAGCAACAGTACCCGCCGCAGCAGCAGCCGCCGCCTTACATGATGATGCCGCCGCAGCCCCAGGCTCCGCCGCAGATGTGGGCCCCCTCCGCACAGGCGCCGCCGCAGCAGGTTGCTGCGCCGCAACAACCCGCTCAGCCGACCAGCTCCGACGAGGTTCGGACCCTCTGGATCGGCGACCTGCAGTACTGGATGGACGAGAACTACCTCTACACCTGCTTCGCTCATACCGGCGAGGTGACCTCTGTTAAGGTTATTCGGAATAAGCAAACTGGTCAGTCTGAGGGCTATGGTTTTATTCGAGTTCAGCAGTCGTGCCGGTGCTGA 381 0.622 MMQPGPGMAPPNMGQQPPQQQYPPQQQPPPYMMMPPQPQAPPQMWAPSAQAPPQQVAAPQQPAQPTSSDEVRTLWIGDLQYWMDENYLYTCFAHTGEVTSVKVIRNKQTGQSEGYGFIRVQQSCRC* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0833 126 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 74 121 IPR000504 GO:0003723
Dod03g0833 126 Gene3D - 36 123 IPR012677 -
Dod03g0833 126 SUPERFAMILY RNA-binding domain, RBD 49 119 IPR035979 GO:0003676
Dod03g0833 126 MobiDBLite consensus disorder prediction 49 69 - -
Dod03g0833 126 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 72 126 IPR000504 GO:0003723
Dod03g0833 126 MobiDBLite consensus disorder prediction 1 69 - -
Dod03g0833 126 MobiDBLite consensus disorder prediction 1 48 - -
Dod03g0833 126 PANTHER OS03G0569900 PROTEIN 28 120 - -
Dod03g0833 126 CDD RRM1_SECp43_like 73 118 - -
Dod03g0833 126 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 28 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0833 Dod-Chr3 10303017 10303845 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0833 73 118 Eukaryotic Initiation Factors Gene Family AT1G49760 36.957 7.70e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0833 - - aprc:113864230 120.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2817 05 54179553 54183565 Dod03g0833 03 10303017 10303845 PCT