Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0800 ATGTCTCACATAGCAGTTGAGAGGAACAGGAGAAGACAGATGAATGAACATCTCAAAGTTTTAAGGTCCTTGACCCCATGTTTCTATATTAAAAGGGGGGATCAAGCTTCTATAATAGGGGGAGTTATAGAGTTCATCAAGGAGCTACACCAAGTGCTTCAAGCTTTGGAGTCCCAGAAGAGAAGAAAGAGTCTAAGCCCTAGCCCTGGCCCCAGTCCAAGAACACTGCAGCCAACGTTTCATCAAATTGATAACTCCTCTTCCGGAATTGGTGGTGCTGGTTCCTTTAAGGAACTAGAAGCAAGCTGCAACTCTTCAGTTGCGGATGTGGAAGTGAAGATCTCGGGTTCGAATGTGATTCTGAGAGTGATTTCCCACAGGATTCCGGGTCAAGTTGCCAAGATCATAAGTGTTCTTGAAGGCCTTTCGCTTCAAGTCCTTCATCTCAACATCACTAGCATGGAGGATACGGTCCTCTACCATTTTGTTGTTAAGATAGGGCTGGAATGTCAACTTAGTCTGGAAGAACTGGCAATGGAAGTACAACAAAGCTTCTGCCCAGAGGCTATTATTACTGCGCTGTGA 585 0.4513 MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVLQALESQKRRKSLSPSPGPSPRTLQPTFHQIDNSSSGIGGAGSFKELEASCNSSVADVEVKISGSNVILRVISHRIPGQVAKIISVLEGLSLQVLHLNITSMEDTVLYHFVVKIGLECQLSLEELAMEVQQSFCPEAIITAL* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0800 194 MobiDBLite consensus disorder prediction 60 81 - -
Dod03g0800 194 SMART finulus 4 55 IPR011598 GO:0046983
Dod03g0800 194 PANTHER TRANSCRIPTION FACTOR FAMA 1 191 IPR044283 GO:0003700|GO:0010052
Dod03g0800 194 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Dod03g0800 194 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Dod03g0800 194 Gene3D - 1 64 IPR036638 GO:0046983
Dod03g0800 194 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 68 IPR036638 GO:0046983
Dod03g0800 194 PANTHER TRANSCRIPTION FACTOR MUTE 1 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0800 Dod-Chr3 10002484 10004764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0800 1 193 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 65.686 8.87e-88 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod03g0800 HLH 4.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0800 - - gmx:100810771 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0800 03 10002484 10004764 Dod03g0800 03 10002484 10004764 ECH