Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0792 ATGATTAATATCTCCTCATCAGTATCTGCCTCCTTAGCTTGCAAACAAGTAGAACAGCCCCTAGTAAGATTCCAAAAGGGGATGTCCAACATGGATTCATTGTTCCACCAATACCGCAAGGATAAGGTGGTGGTGTTATTGGGGGCCACCGGAACGGGCAAGACCAAGCTGGGCATAGACCTTGCCAACCACTTCCCTCCAGCTGAGATAGTTAACTCCGACAAAATGCAAGTTTACAAGGGCCTTGACATCACCACCAATAAGGTCACCGAGGAAGAGTCACGTGGGGTCCCACACCACCTCTTGGGTACCATTGACCCTAATGCCAACTTCACCGCCTCCGATTTTTGTCGCCAAGCAACCTCAGCCGTTGATTCCATCGTTGGCAGGGACGGCCTCCCCATCATCGCTGGTGGGTCGAACTCCTACATCGATGCACTTGTGAACCATCACCCCAATTTCAGAATAAGGTACGAGTGTTGCTTCCTCTGGGTGGATGTTTCCCTCCCAGTTCTCCATTCCTCTCTGCAAACACGTGTGGATCGCATGATTGAAGCTGGTCAAGTCGACGAAGTTCGTGAGTTCTTCGACCCTCTTGCCGATTACACAAAAGGGATACGAAGGGCCATTGGGGTGCCCGAATTCGACGAGTTTCTGAGAGCAGAGGCCGCAGGAGCAGACGAAGGGACAAAAAAGAAGCTCTTAGAGATTGCCATTGCGAAGATCAAGGTCAACAACTGCACGCTCGCGAATCGGCAAATCCAAAAGATTCAACGGCTCTACAACATGTGGAAGAGAAGCAGGCACCGCCTCGACGCCACCGAGGTTTTCTTGAAGAGTGGCTCTGAATCCGAGGCAGAGGCTTGGGAGGAACACGTGTTGGCAAAGAGCCTTAGGATCGTGCACAGGTTCCTGTACGAGGAAGAGAGGAACAGTAGTGTTCCTGTTGGTGTTTCACCCAAAGATGTTATCGGTGCCGTTTCTTCGCCGGCGGTCGCAATGGTGGCGAGTCATTAG 1017 0.5162 MINISSSVSASLACKQVEQPLVRFQKGMSNMDSLFHQYRKDKVVVLLGATGTGKTKLGIDLANHFPPAEIVNSDKMQVYKGLDITTNKVTEEESRGVPHHLLGTIDPNANFTASDFCRQATSAVDSIVGRDGLPIIAGGSNSYIDALVNHHPNFRIRYECCFLWVDVSLPVLHSSLQTRVDRMIEAGQVDEVREFFDPLADYTKGIRRAIGVPEFDEFLRAEAAGADEGTKKKLLEIAIAKIKVNNCTLANRQIQKIQRLYNMWKRSRHRLDATEVFLKSGSESEAEAWEEHVLAKSLRIVHRFLYEEERNSSVPVGVSPKDVIGAVSSPAVAMVASH* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0792 338 Gene3D - 40 305 IPR027417 -
Dod03g0792 338 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 34 311 - -
Dod03g0792 338 Pfam IPP transferase 156 255 - -
Dod03g0792 338 Pfam IPP transferase 77 151 - -
Dod03g0792 338 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 169 268 - -
Dod03g0792 338 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 34 311 IPR039657 -
Dod03g0792 338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 200 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0792 Dod-Chr3 9861118 9863917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0792 157 316 C2H2 Transcription Factor Family AT2G27760 31.720 3.02e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0792 K10760 - gmx:100812928 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0792 03 9861118 9863917 Dod03g0792 03 9861118 9863917 ECH
Dod05g2786 05 53956126 53957902 Dod03g0792 03 9861118 9863917 PCT