Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0747 ATGAGCGATGAACGAGAACCACAAGCTTCCTCGAGCAATGACGTCCACAACCACAACTCCGAGAAAAAACAAACAATAGAAAGGAGGAGTTCACATTCTACTAGAGGCAGAAGAACACGAACCGGTTTTTCTGATTCCTTCTCAAGCATTGACTTCACGGCTTTAGACATTGAGGAGGGAGGTTTACCTGACTACTCTCCTAGAAATATAGAATCTGGAACCCCTTCTTTCAAGGCCAGCACTTCTGATTCTGAGGCTCAGGCAGGTTTAAGTGATGGTAATAACAACAACCAGTGGCGTGGTTTCTTTAAGCTGTTGAAGAAAGGATCCCAAATGCCCTTCCAGACCTTTCATCCACTTAAGAATGTGCCAAGGTTAACTAGGAGGAAAAGCAAAAGGATCAGGGAGGACCTGATTCCATCACTGAATACTCCAGATTTGAATTCATCATCTTTTGACACAGAGTTTTGCTGCTTTAAAGCTTCCTGGAAAAATTTCACCCTCTCAGAGCTCCAGATTGCCACCAATGACTTCAGCCATGATAATTTGATTGGGGAGGGAGGTTATGCTGAGGTTTACTTAGGCAAATTGGAAGATGGGAACTTTGTTGCCATTAAGAGGCTGACAAGAGGGAGCCAAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGCATAATAGTACACGTGGACCACCCCAATATTGCTAGATTGATTGGATATGGTGTTGAAGGTGGAATGTTCCTTGTTCTTCAGCTGTCTCCACATGGTAGCCTGTCATCCATACTTTATGGACCTCGTGAGAAACTGAATTGGAGCATCAGATATAAGATTGCTGTGGGGACTGCTGAGGGCCTTCACTATCTGCATGAGGGATGTCAAAGAAGGATCATTCACAAAGACATCAAGGCTTCTAATATACTGCTCTCAGAGGATTTTGAGCCTCAGATATCTGATTTTGGGCTTGCAAAGTGGTTACCTGACCAATGGACTCACCATACTGTCTCCAAAATAGAGGGCACATTCGGCTACCTTCCTCCTGAATTCTTCATGCATGGTATAGTGGATGAAAAGACTGACGTCTATGCTTATGGTGTGCTATTATTGGAGCTCATTACTGGAAGACAAGCTCTGGATAGCTCACAAAAAAGTCTGGTGATGTGGGCAAAACCTTTGCTATCTGAAAATAACATCAAAGAGCTTGTTGATCCAATTCTGGGTGATGCTTATGATGAAGAGCAGATGAAACTGCTGATCTTAACAGCTTCTCTGTGTGTAGATCAGTCTTCAATTCAACGACCGCAAATGAGTGAGGTATTAGAAATACTAAGAGGTGATGAAGGGAGGTTGAAGTCCATGAAAGAACGGCAGAAGTCAAAACTGAAGCGGACATACTCTGTAGAGCTCTTTGATGCAGAAGAGTACAACTCAACCAAGTATTTGAATGAGAGCCAGAGGGATCGCCATATGGAGACTATTCTAGGCTCCACTAATAACTCCATCAAAGAAGAAAGCAATGAAAACTAG 1527 0.4316 MSDEREPQASSSNDVHNHNSEKKQTIERRSSHSTRGRRTRTGFSDSFSSIDFTALDIEEGGLPDYSPRNIESGTPSFKASTSDSEAQAGLSDGNNNNQWRGFFKLLKKGSQMPFQTFHPLKNVPRLTRRKSKRIREDLIPSLNTPDLNSSSFDTEFCCFKASWKNFTLSELQIATNDFSHDNLIGEGGYAEVYLGKLEDGNFVAIKRLTRGSQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLNWSIRYKIAVGTAEGLHYLHEGCQRRIIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKIEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLSENNIKELVDPILGDAYDEEQMKLLILTASLCVDQSSIQRPQMSEVLEILRGDEGRLKSMKERQKSKLKRTYSVELFDAEEYNSTKYLNESQRDRHMETILGSTNNSIKEESNEN* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0747 508 ProSiteProfiles Protein kinase domain profile. 178 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0747 508 MobiDBLite consensus disorder prediction 61 95 - -
Dod03g0747 508 Gene3D Phosphorylase Kinase; domain 1 151 252 - -
Dod03g0747 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 297 309 IPR008271 GO:0004672|GO:0006468
Dod03g0747 508 MobiDBLite consensus disorder prediction 1 32 - -
Dod03g0747 508 SMART serkin_6 178 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0747 508 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 32 482 - -
Dod03g0747 508 SUPERFAMILY Protein kinase-like (PK-like) 160 443 IPR011009 -
Dod03g0747 508 MobiDBLite consensus disorder prediction 69 95 - -
Dod03g0747 508 MobiDBLite consensus disorder prediction 1 43 - -
Dod03g0747 508 Gene3D Transferase(Phosphotransferase) domain 1 255 471 - -
Dod03g0747 508 Pfam Protein tyrosine and serine/threonine kinase 181 441 IPR001245 GO:0004672|GO:0006468
Dod03g0747 508 PANTHER OS08G0249100 PROTEIN 32 482 - -
Dod03g0747 508 ProSitePatterns Protein kinases ATP-binding region signature. 184 206 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0747 Dod-Chr3 9258090 9262407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0747 150 458 Receptor kinase-like Gene Family AT1G53420 41.325 1.85e-73 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Dod03g0747 PK_Tyr_Ser-Thr 6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0747 - - lja:Lj6g3v1915960.1 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0747 03 9258090 9262407 Dod03g0747 03 9258090 9262407 ECH
Dod03g0747 03 9258090 9262407 Dod01g3418 01 75342004 75346471 ECH
Dod03g0747 03 9258090 9262407 Dod01g2370 01 62302319 62306217 ECH
Dod03g0747 03 9258090 9262407 Dod07g0499 07 6564139 6569020 ECH