Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0718 ATGGGGTGTGTGTTTGGGAGACAGTCATCGGAGAAGTCCAGTGGGGCGGCGGCGGAGGCGGCGGAGGAGAGAGAGAGGAGGAGGGAGGAGAGGAGAGAGGAGGTGAAGGAAGCAAAAGGTGAAGTGGGTGAGGCTCAGAATGGTGGTGGGCATCAGAAAGAGGGTGGTGGTGGTGAGGAGAAGAGGACAAGGGCAAGAGGTGAGAGGAGGAGATCTTCAAAGCCAAATCCAAGGCTGAGCAATCCACCAAACCATGTCCATGGTGAGCAGGTGGCAGCAGGGTGGCCCTCTTGGCTCTCCAAGGTTGCAGGGGAAGCCATCAATGGATTGACCCCTAGGAGGGCTAACACTTTTGAGAAGCTTGATAAGATTGGACAAGGTACATACAGCAATGTTTACAAAGCTAGGGATATTTTAACGGGGAAAATTGTTGCCCTAAAGAAAGTCCGTTTCGACAATCTGGAGCCGGAGAGCGTGAAATTCATGGCAAGAGAGATTCTGATTCTGCGTCGTCTGGATCATCCCAATGTTCTCAAACTGGAAGGCCTAGTGACTTCTAGAATGTCGTGTAGTCTATATCTTGTGTTTGAATACATGGTGCATGATTTGGCTGGACTTGCTACAAACCCAGCAATCAAATTCACAGAGGCTCAGGTTAAATGTTACATGCATCAGCTATTTTCTGGGCTGGAACATTGCCACAACCGTCATGTGCTGCATCGTGATATAAAGGGGTCAAACCTTCTTATTGACAATGATGGAGTTCTTAAGATTGCTGATTTTGGATTAGCTTCCTTCTTTGATCCTAATCACAGGCATCCTATGACCAGTAGAGTGGTGACTTTATGGTATCGACCTCCGGAACTTCTTCTTGGGGCCACTGAATATGGTGTAGGAGTGGACCTCTGGAGTGTTGGCTGCATTCTTGCAGAATTGTTGGCTGGAAAGCCTATTATGCCTGGTCGAACAGAGGTGGAACAGCTCCATAAGATATTTAAGTTATGCGGTTCTCCTTCTGATGAATATTGGAAAAAATCAAAGTTGCCGCATGCCACCATTTTTAAACCCCAACAATCGTACAAGCGGTGCATAGCAGAGACCTTTAAAGATTTTCCACCATCATCCCTGCCACTTATTGAGACCCTTCTTGCAATTGATCCAGCTGAACGTCTGACTGCCACTGCAGCATTGCATAGTGAATTCTTTACAACAAAACCTTATGCTTGTGAACCCTCTAGCCTTCCAAAGTATCCTCCCAGCAAGGAGATGGATGCAAAGCTACGAGATGAAGAAGCTAGAAGATTGAGAGCTGCTGGTAAAGCTAATGCTGACGGTGTTAAGAAATCTCGTCCACGTGATCGAGTTGGGAGGGGAATTCCAGTCCCAGAGGCCAATGCTGAACTGCAAGCAAATATTGATAGACGGAGACTGATAACGCATGCAAATGCTAAGAGCAAGAGCGAGAAGTTTCCTCCTCCCCACCAAGACGGAGCTCTAGGCTATCCTTTGGGTTCGTCGCATCACATGGATCCAGTTTTCGATCCTCCTGATGTTCCCTTCAGTTCCACAAACTTCTCACAACCTAAAGCAAGTATGCAAACCTGGTCCGGCCCGTTGGTAGAATCTGCTGGTGGCGGTGCACCAAGGAGAAAGAAGAAACATGGTAGGTGA 1671 0.4782 MGCVFGRQSSEKSSGAAAEAAEERERRREERREEVKEAKGEVGEAQNGGGHQKEGGGGEEKRTRARGERRRSSKPNPRLSNPPNHVHGEQVAAGWPSWLSKVAGEAINGLTPRRANTFEKLDKIGQGTYSNVYKARDILTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVLKLEGLVTSRMSCSLYLVFEYMVHDLAGLATNPAIKFTEAQVKCYMHQLFSGLEHCHNRHVLHRDIKGSNLLIDNDGVLKIADFGLASFFDPNHRHPMTSRVVTLWYRPPELLLGATEYGVGVDLWSVGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSDEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERLTATAALHSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGKANADGVKKSRPRDRVGRGIPVPEANAELQANIDRRRLITHANAKSKSEKFPPPHQDGALGYPLGSSHHMDPVFDPPDVPFSSTNFSQPKASMQTWSGPLVESAGGGAPRRKKKHGR* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0718 556 PANTHER CELL DIVISION PROTEIN KINASE 69 555 - -
Dod03g0718 556 MobiDBLite consensus disorder prediction 519 538 - -
Dod03g0718 556 SMART serkin_6 118 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0718 556 MobiDBLite consensus disorder prediction 436 457 - -
Dod03g0718 556 MobiDBLite consensus disorder prediction 17 41 - -
Dod03g0718 556 SUPERFAMILY Protein kinase-like (PK-like) 113 407 IPR011009 -
Dod03g0718 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Dod03g0718 556 CDD STKc_CDK9_like 118 402 - -
Dod03g0718 556 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Dod03g0718 556 Gene3D Transferase(Phosphotransferase) domain 1 201 441 - -
Dod03g0718 556 Pfam Protein kinase domain 118 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0718 556 ProSiteProfiles Protein kinase domain profile. 118 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0718 556 MobiDBLite consensus disorder prediction 54 75 - -
Dod03g0718 556 Coils Coil 17 41 - -
Dod03g0718 556 MobiDBLite consensus disorder prediction 436 556 - -
Dod03g0718 556 MobiDBLite consensus disorder prediction 1 89 - -
Dod03g0718 556 PANTHER CYCLIN-DEPENDENT KINASE 69 555 - -
Dod03g0718 556 MobiDBLite consensus disorder prediction 469 491 - -
Dod03g0718 556 Gene3D Phosphorylase Kinase; domain 1 106 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0718 Dod-Chr3 8943400 8948876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0718 113 440 Core Cell Cycle Gene Families AT5G10270 51.744 2.90e-117 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dod03g0718 Pkinase 8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0718 K08819 - gmx:100779413 956.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0718 03 8943400 8948876 Dod03g0718 03 8943400 8948876 ECH