Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0708 ATGGGTGGCTGTTTCCCCTGTTTTGGATCATCCAACAAGGAGGAAAGTGGTGTTGGTGTTGGTGGGGTCAAGAAGGAACTGCCCAAGAAGGAGTCTTTCAAGGAAACTTCAGCTCCTCAGTCTCATCACCACCCCAGCAGGGTTAGCTCAGATAAATCAAAATCGCGAACTGGCTCAGATCCTAAGAAGGAAACACCAGTTCCAAAGGATGGACCAACAGCCCATATTGCTGCACAAACATTCACATTCCGGGAGCTTGCAGCCGCCACAAAGAATTTTAGGCCAGAAAGTTTATTAGGTGAAGGAGGTTTTGGACGAGTTTACAAAGGTCGCCTTGAGAGCACAGGACAGGTAGTTGCTGTAAAGCAGCTTGACCGAAATGGCCTTCAAGGAAATCGAGAGTTTTTGGTGGAGGTTCTCATGCTGAGCCTATTACATCACCCAAATCTTGTGAACTTGATCGGCTATTGTGCTGATGGTGATCAGAGGCTGCTTGTTTATGAATTTATGCCTTTGGGGTCTTTGGAGGATCATTTACATGATCTTCCTCCTGACAAGGAGCCTCTGGACTGGAACACTAGGATGAAAATAGCAGCTGGTGCAGCAAAAGGATTGGAATATTTGCATGACAAGGCAAACCCCCCTGTGATATATAGAGACTTAAAATCATCCAACATCCTCCTAGATGACGGTTATCATCCCAAGTTATCAGATTTTGGGTTGGCAAAACTTGGTCCTGTTGGTGACAAGACACATGTATCTACTCGAGTAATGGGAACATATGGTTATTGTGCCCCTGAATATGCCATGACTGGTCAACTGACACTGAAGTCTGATGTCTACAGTTTCGGAGTTGTCTTCCTTGAACTTATTACCGGGCGCAAGGCCATTGATAATGCACGTGCACATGGAGAGCATAATCTCGTTGCATGGGCACGACCTCTTTTCAAAGACCGTAGGAAGTTTCCCAAAATGGCTGACCCTCTACTTCAAGGCCGATATCCAATGCGAGGACTGTACCAAGCACTTGCAGTTGCAGCAATGTGCTTGCAGGAACAAGCTGCCACAAGGCCTCTCATTGGAGATGTTGTGACTGCTCTCACATATCTGGCCTCCCAGACATATGACCCAAATGCTGCCAATCAATCCAACAGAGTTGGTCCTTCAACCCCCAGGAGCAGGGATGACAGAAGGACCATGGCAGATGGTGTGGACAGCCCAGATCGTGGACGGCTTGGCTCCCCTTCCACCCACAGAAACTCACCTGATTACAGGAGGAGAGACATTAGGGAACCAGGTGCTGCTGCTGGGACAGAGTTAGGAAGGAGTGTATCTGGTGGTGGTGGGTCAGGGAGAAAATGGGGATTAGATGATGTAGAAAGGCAGGAATCTCAGAGAGACAGCCCTGTAAATATTGGAAGAGCTAGAGAGACTCCCAGGAACCGTGACCTGGACAGAGAACGCGCGGTTGCGGAAGCTAAAGTATGGGGTGAGAATTGGAGAGAGAAGAAGAGAGCAAATGCCATGGGTAGCTTTGATGCCACAAATGAGTGA 1554 0.4813 MGGCFPCFGSSNKEESGVGVGGVKKELPKKESFKETSAPQSHHHPSRVSSDKSKSRTGSDPKKETPVPKDGPTAHIAAQTFTFRELAAATKNFRPESLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDDGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNARAHGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAANQSNRVGPSTPRSRDDRRTMADGVDSPDRGRLGSPSTHRNSPDYRRRDIREPGAAAGTELGRSVSGGGGSGRKWGLDDVERQESQRDSPVNIGRARETPRNRDLDRERAVAEAKVWGENWREKKRANAMGSFDATNE* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0708 517 ProSiteProfiles Protein kinase domain profile. 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0708 517 Gene3D Transferase(Phosphotransferase) domain 1 170 387 - -
Dod03g0708 517 MobiDBLite consensus disorder prediction 377 487 - -
Dod03g0708 517 MobiDBLite consensus disorder prediction 390 405 - -
Dod03g0708 517 CDD STKc_IRAK 99 368 - -
Dod03g0708 517 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Dod03g0708 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Dod03g0708 517 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 1 511 - -
Dod03g0708 517 MobiDBLite consensus disorder prediction 1 74 - -
Dod03g0708 517 SMART serkin_6 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0708 517 SUPERFAMILY Protein kinase-like (PK-like) 79 383 IPR011009 -
Dod03g0708 517 Gene3D Phosphorylase Kinase; domain 1 77 169 - -
Dod03g0708 517 PANTHER OS07G0668900 PROTEIN 1 511 - -
Dod03g0708 517 Pfam Protein kinase domain 96 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0708 517 MobiDBLite consensus disorder prediction 24 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0708 Dod-Chr3 8837596 8846097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0708 73 372 Glycoside Hydrolase AT3G07070 75.000 1.89e-167 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dod03g0708 Pkinase 6.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0708 - - adu:107468111 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2725 05 53388448 53392869 Dod03g0708 03 8837596 8846097 PCT