Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0693 ATGTCACTTTCCTGTGCCAAAAACTTCTTCCAGAGGTTCTGGGTGGATGAGTTCGAAATGAGAAGTTTTTCCCACAGCAGCTTTTTGTCCAATGATCTCTTGCCATCTCTTGGAGCAAGAATAAACCAGGAAACTAAACTTAGAAGATACATAATCTCCCCTTACAACCCCCGTTATAGGGCTTGGGAGATGTTACTGGTTGTTCTCGTGGCTTACTCAGCTTGGATTTGCCCCTTTGAGTTTGCCTTTCTGTCTTACAAGCGAGACACACTATTCATCATAGACAACATTGTCAATGGCTTCTTTGCCATTGACATCGTTCTGACATTCTTTGTTGCATATCTAGATAACCAGTCTTATCTTCTTGTTGATGATCCCAGGAGAATTGCAGTCAGGTACATATCTACCTGGTTTGCCTTTGATGTCTGCTCAACAGCTCCATTCCAATCCATCAGCCTCCTCTTCACAAATCACAGCAGTGAGCTTGGTTTCAAAATTCTTAACATGCTTCGATTATGGCGCCTCAGACGAGTCAGTTCTCTTTTTGCAAGACTTGAAAAGGACATCCGATTCAATTACTTCTGGACTAGGTGCACAAAGCTCATTGCTGTAACCTTGTTTGCAGTACACTGTGCTGGGTGCTTTAACTATCTGATTGCAGCTAGGTACCGGGATCCCAAGAGAACCTGGATTGGTGCAATGTACCCGAATTTCAAAGAATTAAGCCTTTGGGACAGATATGTCACTGCAATGTACTGGTCCATTGTAACTCTTACTACCACTGGCTATGGAGATTTACACGCTGAGAACCCAAGAGAGATGTTGTTTGATATCTTTTACATGCTGTTCAACTTGGGTCTAACATCATACATCATTGGAAACATGACAAACCTTGTAGTCCACTGGACCAGCCGCACCAGAAATTTTAGGGACACAGTCAGAGCAGCTTCTGAATTTGCTTCAAGAAACTATCTGCCCCGTCGCATACAGGATCAAATGTTGTCACACATATGTTTGAAGTTCAAAACAGAAGCATTGAAGCAGCAAGAAACGTTGAATGATCTGCCAAAGGCAATTCGTTCAAGCATTGCACATCATCTCTTTTTTCCTGTTGTGCAGAAGGTCTACCTCTTCCAAGGAGTCTCCCATGACTTCCTTTTCCAATTGGTAGTTTCAGTAATGGAAGCTGAGTATTACCCACCCAAGGAAGATGTCATACTGCAAAACGAGTCTTCTACAGACTTTTACGTGCTGGTTTCAGGGGCAGTGGATCTCATTGGCTATGTTGATGGGCATGAACAAGTTCTTGGCAAAGCAATGGCAGTGGATACGTTTGGAGAGATTGGAGTGTTATATCATATACCTCAGCCTTTCACTGTTCGAACCACCGAGCTTTCTCAAATATTAAGACTCAACAGAACATCATTGTTGAATGTTTTACATGCAAATCCTGGTGATGCACAAGTTGTGATGGACAACCTTTTCATGGTAATTAGAAAACATGGGGAAAATATTTCAGGCTTTGAAAATCCACGTACAGATCCTGGGTTGGTTCTTCATGAACTGCTTGATGGAGGCAACAAAAGAGAGTGCTCATCTCATGAGTGTACAGATAATTCGCATGGTCATTCATTAGCTCAGGAAGGAAACTGCATAAATATCAGAGATTCAGAGGCCAGTTTGCATAAGGTGACTCACCATGATCATTTAATCACTAAATATAACCTGTTTAATGTGGATGGCAAAAGGGATCTTCATGCCTCAGCACACAAAGGGAATCTAGATATCGTTGATATTCTGCTTGAAAGAGACGCAAATGCAAAGAACCCAAATGCCACTGGGTGGACACAAAAAGCAGCTCTAGTAGAACAGTTAAGGAAAAAGGGCATCTCTGACCAAATAATGGGTTGTGAAAACGAGAGGAAATCAGATGAATATAGAATAGAGGTTGAGAAGCCAGAAATCCTTAACCTTGACAGGAATGACTCAAACAGAAGCACAAGGCAAGATGCTATTAGATCTATCAACTTCCCATCACAGAAAGTATGCACAAACTCCTTTCCTAGAAATTCTAACTGTCATGGGAATAGAGAAATGGCTAGGTTCATCAAAAAGAGAGTTACAATCCACTTGCTAAGCAGGTGTAGGAGTACCTCACAGGGACAGCATGGGAAGTTGATAATGCTACCTGATTCATTAGAAGAGCTGCTCAAAATTGCTGGTGAAAAATTTGGAGGCATCAACCCTACACAAGTAATTAATACAGAGAATGCAGAGATAGATGACATAAATGTCATTCGAGATGGAGATCATCTATTCTTTCTTTGCAGTAATAGTGAAATTTTGACATCATGA 2355 0.4144 MSLSCAKNFFQRFWVDEFEMRSFSHSSFLSNDLLPSLGARINQETKLRRYIISPYNPRYRAWEMLLVVLVAYSAWICPFEFAFLSYKRDTLFIIDNIVNGFFAIDIVLTFFVAYLDNQSYLLVDDPRRIAVRYISTWFAFDVCSTAPFQSISLLFTNHSSELGFKILNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLIAVTLFAVHCAGCFNYLIAARYRDPKRTWIGAMYPNFKELSLWDRYVTAMYWSIVTLTTTGYGDLHAENPREMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDTVRAASEFASRNYLPRRIQDQMLSHICLKFKTEALKQQETLNDLPKAIRSSIAHHLFFPVVQKVYLFQGVSHDFLFQLVVSVMEAEYYPPKEDVILQNESSTDFYVLVSGAVDLIGYVDGHEQVLGKAMAVDTFGEIGVLYHIPQPFTVRTTELSQILRLNRTSLLNVLHANPGDAQVVMDNLFMVIRKHGENISGFENPRTDPGLVLHELLDGGNKRECSSHECTDNSHGHSLAQEGNCINIRDSEASLHKVTHHDHLITKYNLFNVDGKRDLHASAHKGNLDIVDILLERDANAKNPNATGWTQKAALVEQLRKKGISDQIMGCENERKSDEYRIEVEKPEILNLDRNDSNRSTRQDAIRSINFPSQKVCTNSFPRNSNCHGNREMARFIKKRVTIHLLSRCRSTSQGQHGKLIMLPDSLEELLKIAGEKFGGINPTQVINTENAEIDDINVIRDGDHLFFLCSNSEILTS* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0693 784 SUPERFAMILY Ankyrin repeat 573 627 IPR036770 -
Dod03g0693 784 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 1 784 - -
Dod03g0693 784 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod03g0693 784 ProSiteProfiles Ankyrin repeat profile. 580 612 IPR002110 GO:0005515
Dod03g0693 784 ProSiteProfiles Ankyrin repeat region circular profile. 580 606 - -
Dod03g0693 784 SUPERFAMILY Voltage-gated potassium channels 54 300 - -
Dod03g0693 784 SUPERFAMILY cAMP-binding domain-like 304 494 IPR018490 -
Dod03g0693 784 Gene3D - 535 652 IPR036770 -
Dod03g0693 784 Gene3D Jelly Rolls 344 504 IPR014710 -
Dod03g0693 784 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod03g0693 784 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod03g0693 784 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod03g0693 784 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod03g0693 784 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod03g0693 784 Gene3D - 60 300 - -
Dod03g0693 784 ProSiteProfiles KHA domain profile. 706 784 IPR021789 -
Dod03g0693 784 CDD CAP_ED 377 491 IPR000595 -
Dod03g0693 784 PANTHER POTASSIUM CHANNEL AKT1 1 784 IPR045319 GO:0005249|GO:0006813
Dod03g0693 784 SMART cnmp_10 377 495 IPR000595 -
Dod03g0693 784 Pfam KHA, dimerisation domain of potassium ion channel 705 774 IPR021789 -
Dod03g0693 784 Pfam Cyclic nucleotide-binding domain 398 481 IPR000595 -
Dod03g0693 784 ProSiteProfiles cAMP/cGMP binding motif profile. 377 480 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0693 Dod-Chr3 8576268 8580434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0693 611 774 Ion Channels AT5G46240 36.585 9.80e-20 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0693 K21867 - gmx:100811356 1209.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0693 03 8576268 8580434 Dod03g0693 03 8576268 8580434 ECH