Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0674 ATGAGGAGGAATTGCAACTTGGAACTAGGCCTTTTTCCTCCCTACGATTCCGGTCACCAACACAACCAACCCATGTTAGAAGATGCTGGTGACCTCCAACAGCATGAACAAAGCCAGCAGCAGGAACAGCACCACCGGCTTACCATTTTCTATGCTGGCAAGATCTGTGTTTCTGATGTCACTGAGCTTCAGGCCAAATCCATCTTGATGCTTGCAAACAAAAAGGCAATGACACCAACAGGCTCCAAGCCAACTTCACCAACGCCAGCAATAGTGCAATCCAATCATCAATTGTATAACACTGGCACTGGCCTTTCCATGAAAAGATCGCTGCAACGGTTCCTCCAGAAGAGAAAGAATCGGATCCAAGAAGCATCCCCATACAACCACTAG 393 0.4758 MRRNCNLELGLFPPYDSGHQHNQPMLEDAGDLQQHEQSQQQEQHHRLTIFYAGKICVSDVTELQAKSILMLANKKAMTPTGSKPTSPTPAIVQSNHQLYNTGTGLSMKRSLQRFLQKRKNRIQEASPYNH* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0674 130 ProSiteProfiles Tify domain profile. 40 74 IPR010399 -
Dod03g0674 130 Pfam tify domain 42 73 IPR010399 -
Dod03g0674 130 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 130 IPR040390 -
Dod03g0674 130 PANTHER - 1 130 - -
Dod03g0674 130 Pfam Jas motif 108 128 IPR018467 -
Dod03g0674 130 SMART tify_2 40 74 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0674 Dod-Chr3 8350102 8353607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0674 1 128 Tify Gene Family AT1G30135 44.697 4.72e-25 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Dod03g0674 tify 8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0674 - - gmx:100500349 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0674 03 8350102 8353607 Dod03g0674 03 8350102 8353607 ECH