Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0664 ATGGCTTTTGAGCCATTGGATTGGTATTGCCAGCCAGTTGCAAATGGAGTATGGACAAGAGCAGTTGAGAATGCCTTTGGTGCTTACACTCCTTGTGCAGTTAGCTCTTTGGTGATCTCCATTTCTCATCTGATACTTCTGGGCCTGTGCGTTTACCGGATATGGTTGATCAAGAAGGATTTCAAAGCCAAAAGGTTCTGTTTAAGGTCAAAACTCTACAGTTATCTTCTGGGGCTGTTGGCTCTATATTGTGTGGCAGAGCCATTATATAGAGCGATCGCCGGAATATCAATTCTAAATTTAGATGGGCAGACTCAGCTTGCTCCATTTGAGATAGTTTCACTGGTCATAGGGGCTCTTACTTGGTGCACTGTGCTGATTTTGCTTGGTGTGGAAACCAACGTCTACATCTGTGAAAGCCGATGGTTTGTCCGATTTGGCTTGATTTTTGCTGTTGTAGGGGATGCTGTTATGTTCAATCTCATCATATCTGCGCAGGAGTTCTATAGCAGATCTGTGCTGTTTTTGTACATCAGTGAGGTGGCCTGCGAGGCTTTATTTGGAATACTTTTGCTGGTGTATATACCTACTTTGGATCCTTATCCTGGTTATACCCCCATTCGGAGTGAATTGATTACTGATGCTGCATATGCTGAACTGCCTGGAGGAGAGCTGATATGTCCTGAGAGGCAGGCCAACTTATTGTCAAAAATACTTTTTTCTTGGATGAATTCCATCATGAAACTAGGATATCAAAGACCGCTTACAGATAAAGATATATGGAAATTAGATACATGGGATCGGACTGAGACACTGAATAATAAGTTCCAAAGATGTTGGGCTGAAGAATCTCGGAAGTCAAAACCTTGGCTTTTAAGAGCATTAAATGCAAGCCTTGGAGGGAGGTTTTGGTGGGGAGGCTTTTGGAAGTCTATGCAAAATGGTGATCCAGCCTGGATTGGCTACATTTATGCCTTCTCAATATTTGTCGGAGTGGTCTTTGGGGTGTTATGTGAAGGTCAATATTTTCAGAATGTCATGCGTGTTGGATTCCGGCTAAGATCAACTCTGGTGGCTGCTGTATTTCGCAAGTCTCTAAGGCTTACTCATGAAGCCCGAAAGCAATTTGCGTCTGGAAAAATAACCAACTTGATGACAACTGATGCTGAGGCACTTCAGCAAATATGCCAGTCACTTCACACTTTGTGGTCAGCTCCATTTCGTATTACCATTGCTATGGTTCTTCTTTATCAGCAACTAGGTGTTGCTTCTCTTCTGGGTGCTATGATGCTAGTTCTTATGTTTCCATTACAGACATTTATCATCAGCAGAATGCAGAAGCTGTCTAAGGAAGGATTACAACGTACAGACAAGAGAATTGGTCTCATGAATGAAATTTTAGCTGCTATGGATACTGTAAAATGTTACGCATGGGAGAGTAGTTTCCAATCTAAAGTAGAGTGGGTCCGAAATGATGAATTATCATGGTTTCGTAAAGCATCATTGCTTGGAGCGTGCAATGCATTCATACTCAACAGCATTCCAGTTTTTGTAACCGTGATTTCTTTTGGAGTGTACACCTTGCTTGGAGGGGATTTGACACCTGCGAGAGCTTTCACATCACTTTCTCTGTTTGCTGTGCTTCGATTTCCTCTCTTCATGCTTCCTAATATTATAACTCAGGTGGTTAATGCAAATGTATCCTTGAAGCGTCTGGAAGATTTGCTCTTAGCAGAAGAGAGAATACTTCTACCAAATCCACCACTTGAGCCCGGATTACCAGCCGTCTCAATCAAGAATGGATACTTTTCTTGGAATGCAAAGGCTGAGAGGCCCACATTGGCAAACATAAACTTGGATATACCTGTTGGTAGCCTAGTTGCTGTTGTTGGAGGTACAGGAGAAGGGAAGACATCACTCGTATCTGCAATGCTTGGAGAACTCCCTCCAGTTGCAGATGCAACTGTTGTTTTGAGAGGGACAGTTGCTTACGTACCCCAAGTTTCGTGGATTTTTAATGCAACTGTACGGGAAAACGTTTTATTTGGTTCTGCCTTTGACCCAAGGAGATATGAAAGGGCAATAGATGTGACTGAACTACGGCATGACCTTGAGTTACTGCCTGGTGGTGATCTCACCGAGATTGGTGAAAGAGGTGTGAACATCAGTGGTGGCCAAAAGCAAAGAGTATCCATGGCTAGAGCTGTCTACTCCAATTCTGATGTGTACATCTTTGATGACCCCCTAAGTGCTCTAGATGCACATGTTGGTAGACAGGTTTTTGATAAATGCATCAAGGGAGAACTTAGAGGGAAGACCCGAGTTCTTGTTACAAATCAGCTGCATTTCCTTTCACAGGTTGATAGAATCATTTTGATCCATGAAGGGCCGTTGTTCCAAAAGCTTATGGAAAACGCAGGAAAGATGGAGGAGTATGAAGAAGAAGAGGTAGATACTGAAACAACTGATCAGAAATCCTCTTCAAAACCAGTGGCCAATGGAGAACTTAATGATTCTGCAAAGAGTGACAGTAAACCGAAAGAAGGAAAATCTGTTCTTATCAAACAGGAAGAACGGGAAACAGGTGTTGTCAGTTTGAAAGTTTTAACAAGGTACAAGAATGCATTAGGAGGCCTTTGGGTGGTTCTAGTTCTCTTTGCATGCTATGTCTCAACAGAAGTGTTACGAATTTCGAGTAGCACATGGTTGAGCCATTGGACTGATCAGAGTGCTTCAGTGGGTTATAATCCTACATTCTATAATCTGATATATGCAGCTCTATCATTTGGTCAGGTTATGGTGACTTTAACAAATTCTTACTGGTTAATCATAACAAGTCTATATGCTGCCAGAAGGTTGCATGAAGCCATGCTTCACTCCATATTACGAGCTCCTATGGTTTTTTTCCATACAAATCCACTTGGAAGAATAATCAACAGGTTTGCAAAGGATCTAGGTGACATTGATCGTAATGTTGCCCCATTTGTCAATATGTTTCTGGGTCAAGTGTCCCAGCTCCTTTCAACTTTCATCCTGATAGGAATTGTCAGCACAATGTCCTTGTGGGCAATAATGCCATTGTTGGTACTCTTTTATGGTGCATATCTATACTTTCAGAGCACAGCCCGTGAAGTAAAGCGCTTAGACTCAATTAGCAGATCTCCTGTATATGCACAATTTGGAGAAGCACTTAATGGTTTATCAACAATTCGTGCTTATAAAGCTTACGACCGGATGGCTGAGATAAATGGGAAATCCATGGACAACAATATACGATTCACTCTCGTGAACATGAGTGGAAATCGATGGCTTGCAATCCGATTGGAAACTGTGGGAGGCCTCATGATATGGTTTACTGCAACCTTTGCTAGAATCAGCAGGCATTTGCATCCACTATGGGCTTTGCTACTTAGTTATGCTTTGAATATTACCAGTTTGCTTACAGCTGTGCTCAGGCTTGCAAGTTTGGCTGAGAATAGTTTGAATGCTGTTGAGCGGGTTGGTACTTATATAGATTTGCCTTCGGAGGCTCCATCTATCATTGAGGATAATCGCCCTCCTCCGGGGTGGCCCTCATCCGGATCAATCAGATTTGAAGATGTTGTACTTCGGTACAGGCCTGAACTTCCTCCAGTGCTGCATGGATTGAATTTCAATATTTATCCAAGCGATAAGGTTGGCATTGTAGGGAGGACAGGAGCAGGAAAATCTAGCATGCTTAATGCTTTGTTTCGAATTGTGGAATTGGAAAGAGGAAGAATATTCATTGATGACTGTGATATCGCAAAGTTTGGGCTTGCAGATTTACGTAAAGTACTTGGCATTATACCTCAGTCTCCTGTTCTCTTTTCAGGAACGGTGAGATTTAATCTTGACCCTTTTAATGAACACAATGATGCTGACCTCTGGGAGGCTCTGGAGAGGGCACATTTGAAGGATGTGATTCGGAGGAATTCTTTGGGGCTTGATGCTGAGGTATCTGAAGCAGGGGAGAACTTCAGTGTTGGACAGAGGCAGTTGTTGAGTCTTTCCCGGGCATTGTTGCGTAGATCGAAGATATTAGTACTTGACGAGGCAACTGCAGCAGTTGATGTCAGAACTGATGCACTCATACAGAAAACAATTCGAGAGGAATTTAAATCCTGTACGATGCTCATTATTGCTCATCGTCTTAACACCATTATTGACTGTGATCGGATTCTCTTACTTGATGGTGGCAAGGTTCTTGAATATGATACCCCTGAGGAGCTGCTATCAAATGAAGGCAGTGCTTTCTCTAGGATGGTGCAGAGTACAGGAGCCGCAAATGCCCAATACTTGCGCAACTTAGCACTTGGTGGGGACAAGTCAGAGAGAGAAGAGAACAAGCGTCTGGATGGCCAGAGAAAATGGTTGGCTTCATCTCGCTGGGCCGCTGCGGCCCAATTCGCTCTTGCTGTTAGTCTCACCTCGTCACATAATGACCTGCAAAGATTGGAAGTAGAAGAAGATAACAGCATTCTGAAGAAAACAAAAGATGCTGTGATAACTTTGCAAGGGGTTCTGGAAAGGAAGCATGATAAAGAAATCGAGGAATCTTTAGAGCGACACCAAATGTCTCCGGATAGCTGGTGGTCATCACTCTACAAGATGATTGAAGGTCTTGCTATGATGAGCAGAATTGCTAGGAACAGGCTTCATCAACCAGGACTACGCATTCGAGGACAGATCAATTGA 4716 0.4296 MAFEPLDWYCQPVANGVWTRAVENAFGAYTPCAVSSLVISISHLILLGLCVYRIWLIKKDFKAKRFCLRSKLYSYLLGLLALYCVAEPLYRAIAGISILNLDGQTQLAPFEIVSLVIGALTWCTVLILLGVETNVYICESRWFVRFGLIFAVVGDAVMFNLIISAQEFYSRSVLFLYISEVACEALFGILLLVYIPTLDPYPGYTPIRSELITDAAYAELPGGELICPERQANLLSKILFSWMNSIMKLGYQRPLTDKDIWKLDTWDRTETLNNKFQRCWAEESRKSKPWLLRALNASLGGRFWWGGFWKSMQNGDPAWIGYIYAFSIFVGVVFGVLCEGQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEARKQFASGKITNLMTTDAEALQQICQSLHTLWSAPFRITIAMVLLYQQLGVASLLGAMMLVLMFPLQTFIISRMQKLSKEGLQRTDKRIGLMNEILAAMDTVKCYAWESSFQSKVEWVRNDELSWFRKASLLGACNAFILNSIPVFVTVISFGVYTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNIITQVVNANVSLKRLEDLLLAEERILLPNPPLEPGLPAVSIKNGYFSWNAKAERPTLANINLDIPVGSLVAVVGGTGEGKTSLVSAMLGELPPVADATVVLRGTVAYVPQVSWIFNATVRENVLFGSAFDPRRYERAIDVTELRHDLELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKGELRGKTRVLVTNQLHFLSQVDRIILIHEGPLFQKLMENAGKMEEYEEEEVDTETTDQKSSSKPVANGELNDSAKSDSKPKEGKSVLIKQEERETGVVSLKVLTRYKNALGGLWVVLVLFACYVSTEVLRISSSTWLSHWTDQSASVGYNPTFYNLIYAALSFGQVMVTLTNSYWLIITSLYAARRLHEAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAPFVNMFLGQVSQLLSTFILIGIVSTMSLWAIMPLLVLFYGAYLYFQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGKSMDNNIRFTLVNMSGNRWLAIRLETVGGLMIWFTATFARISRHLHPLWALLLSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPSIIEDNRPPPGWPSSGSIRFEDVVLRYRPELPPVLHGLNFNIYPSDKVGIVGRTGAGKSSMLNALFRIVELERGRIFIDDCDIAKFGLADLRKVLGIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDGGKVLEYDTPEELLSNEGSAFSRMVQSTGAANAQYLRNLALGGDKSEREENKRLDGQRKWLASSRWAAAAQFALAVSLTSSHNDLQRLEVEEDNSILKKTKDAVITLQGVLERKHDKEIEESLERHQMSPDSWWSSLYKMIEGLAMMSRIARNRLHQPGLRIRGQIN* 1572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0664 1571 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 290 564 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod03g0664 1571 MobiDBLite consensus disorder prediction 810 852 - -
Dod03g0664 1571 Pfam ABC transporter 614 749 IPR003439 GO:0005524
Dod03g0664 1571 Gene3D - 592 836 IPR027417 -
Dod03g0664 1571 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 36 1472 - -
Dod03g0664 1571 Pfam ABC transporter 1213 1361 IPR003439 GO:0005524
Dod03g0664 1571 Pfam ABC transporter transmembrane region 312 552 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod03g0664 1571 Pfam ABC transporter transmembrane region 883 1116 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod03g0664 1571 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 596 820 IPR003439 GO:0005524
Dod03g0664 1571 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 883 1123 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod03g0664 1571 ProSitePatterns ABC transporters family signature. 722 736 IPR017871 GO:0005524
Dod03g0664 1571 CDD ABC_6TM_ABCC_D2 882 1171 IPR044726 GO:0140359
Dod03g0664 1571 ProSitePatterns ABC transporters family signature. 1333 1347 IPR017871 GO:0005524
Dod03g0664 1571 MobiDBLite consensus disorder prediction 824 839 - -
Dod03g0664 1571 CDD ABC_6TM_ABCC_D1 289 572 IPR044746 GO:0140359
Dod03g0664 1571 CDD ABCC_MRP_domain1 596 796 - -
Dod03g0664 1571 SUPERFAMILY ABC transporter transmembrane region 880 1176 IPR036640 GO:0005524|GO:0016021
Dod03g0664 1571 Gene3D ABC transporter type 1, transmembrane domain 273 582 IPR036640 GO:0005524|GO:0016021
Dod03g0664 1571 Gene3D ABC transporter type 1, transmembrane domain 845 1177 IPR036640 GO:0005524|GO:0016021
Dod03g0664 1571 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1196 1430 IPR003439 GO:0005524
Dod03g0664 1571 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1186 1427 IPR027417 -
Dod03g0664 1571 PANTHER ABC TRANSPORTER C FAMILY MEMBER 1 36 1472 - -
Dod03g0664 1571 CDD ABCC_MRP_domain2 1194 1414 - -
Dod03g0664 1571 SMART AAA_5 1222 1415 IPR003593 -
Dod03g0664 1571 SMART AAA_5 623 810 IPR003593 -
Dod03g0664 1571 SUPERFAMILY ABC transporter transmembrane region 303 576 IPR036640 GO:0005524|GO:0016021
Dod03g0664 1571 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 594 800 IPR027417 -
Dod03g0664 1571 Gene3D - 1179 1432 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0664 Dod-Chr3 8140246 8167707 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0664 1193 1442 Calmodulin-binding Proteins AT2G36910 29.688 4.23e-29 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0664 - - gmx:100801762 2690.99