Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0635 ATGCTCACAGAGAATAGAAAGAAGCCATCATTGAAAATGGCAAGATTTAGTTATAGTGCTACATCTGACTATTTCATCTGCCATAGGATTCTACTTCCCCTTCTTTTATTATCACAGACTTGTTTTCAACTTACAACCTCCGGCAACATAGTAAAGTTCCTACCTGGGTTCCAGGGGCCACTTCCTTTTGTGCTTGAAACTGGGTATGTGGGAGTGGGTGAAAATGATGATGTGCAAGCTTTCTACTACTTCATTGAATCAGAGAACAATCCAAAGGAGGATCCTCTCATGCTTTGGCTAACCGGTGGTCCTGGTTGCTCTGCCTTGTCTGGCCTTGTCTTTGAAATAGGTCCACTTGCATTTAAAATGGAGGAATACAGAGGAAGCCTGCCTAATTTGGTCTTGAAGCCACACTCATGGACAAAGGTAAGCAGCATTATATTTGTAGACTTGCCAGTTTCCACAGGCTTCTCTTATGCCAGAACAGAATCTGCAGCTCAACGAAGCGACTGGTCCCTAGTTCACCAGGCCCATCAATTTCTTAGGAAGTGGCTCATTGATCATCCGGAATTTCTCTCAAACGATGTTTACATCGGTGGTGATTCATACTCTGGCATTCCTGTGCCAGTAATTGTTCAAGAAATTTCACAAGGAAATGAAGAAGGGGTTCAACCATGGATAAATCTCCAGGGGTACCTGCTGGGCAATGCTGTAACAAGTGGAAGGGAAGGAAACTATGAAATCCCCTTTGCTCATGGAATGGCACTTATTTCAGATGAGCTATACGAGTCACTGCAAAAAAATTGTAAAGGAGAGTATATAAATATAGACCCAAGAAACGTGTTGTGTTCAAGAGACATTAAATCCTACAATGAGGCTACATCAGGACTTAATACAGCGCATATTTTGGAACCGTTATGCGAGTGGAGGACTTCGCCTAAGCCATTGCAAGGTTCTTGGAGGAGATCTCTGTCTGAGAAATATCCCCGGAATTTCCTCACTTCTCGTCTCAATCTCACATTGCCACCGTTGAGCTGTCGGAGTTATGCATACTTCCTTTGCACTTATTGGGCCAATGACGATAATGTTCGCAATGCACTGCACATAAGAAAGGGAAGTATAGGGGAATGGCAACGGTGTACCTTTGGTATACCTCACGAGAGGGACATACCTGAAAGCTATGAGTATCATGTAAATCTCAGTAGAAAAGGGTACCGCTCACTTATATACAGTGGTGATCATGACTTGGGGGTTTCTTTCTTGGGGACTCAAGCGTGGATAAGATCCTTAAACTACTCCATTGTGGATGATTGGAGGCAATGGCAGACAAATGGCCAAGTTGCAGGATACACAAGGGCTTACTCCAATCGGATGACATTTGCAACCGTGAAGGGTGGAGGCCACACAGCTCCAGAGTACAAGCCTGAAGAATGCTTTGCCATGTTCAGTAGGTGGATATCTAGGAAGGCTTTGTAG 1476 0.4404 MLTENRKKPSLKMARFSYSATSDYFICHRILLPLLLLSQTCFQLTTSGNIVKFLPGFQGPLPFVLETGYVGVGENDDVQAFYYFIESENNPKEDPLMLWLTGGPGCSALSGLVFEIGPLAFKMEEYRGSLPNLVLKPHSWTKVSSIIFVDLPVSTGFSYARTESAAQRSDWSLVHQAHQFLRKWLIDHPEFLSNDVYIGGDSYSGIPVPVIVQEISQGNEEGVQPWINLQGYLLGNAVTSGREGNYEIPFAHGMALISDELYESLQKNCKGEYINIDPRNVLCSRDIKSYNEATSGLNTAHILEPLCEWRTSPKPLQGSWRRSLSEKYPRNFLTSRLNLTLPPLSCRSYAYFLCTYWANDDNVRNALHIRKGSIGEWQRCTFGIPHERDIPESYEYHVNLSRKGYRSLIYSGDHDLGVSFLGTQAWIRSLNYSIVDDWRQWQTNGQVAGYTRAYSNRMTFATVKGGGHTAPEYKPEECFAMFSRWISRKAL* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0635 491 SUPERFAMILY alpha/beta-Hydrolases 51 489 IPR029058 -
Dod03g0635 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 184 209 IPR001563 GO:0004185|GO:0006508
Dod03g0635 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 149 159 IPR001563 GO:0004185|GO:0006508
Dod03g0635 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 148 IPR001563 GO:0004185|GO:0006508
Dod03g0635 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 458 471 IPR001563 GO:0004185|GO:0006508
Dod03g0635 491 Pfam Serine carboxypeptidase 55 487 IPR001563 GO:0004185|GO:0006508
Dod03g0635 491 Gene3D - 346 490 - -
Dod03g0635 491 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 27 490 - -
Dod03g0635 491 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 490 IPR001563 GO:0004185|GO:0006508
Dod03g0635 491 Gene3D alpha/beta hydrolase 45 315 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0635 Dod-Chr3 7845202 7849875 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0635 47 74 Calmodulin-binding Proteins AT2G22960 75.000 3.41e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0635 K16296 - gmx:100792006 781.171