Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0633 ATGTCCATGATGATGGCTAAAATGTCAAGTCGTGGCCAAATTGCTTATGCAGAAGCAGGAAATGTTGTTGAACAAACAGTGGGAGCCATTAGAACAGTTGCATCTTTTACTGGTGAAAAGAAAGCAATAGAAAAGTATAATAGCAAGTTGAAAGTTGCCTATGCTACAATGGTTCAACAAGGAATGGCCTCAGGGATAGGAATGGGAGTACTATTGCTCATTATCTTCAGCACCTATGGACTTGCCATGTGGTATGGTTCCAAACTGATCATTGAGAAAGGATACCAGGGTGGAACCGTCATCAATGTAATCATTGCTCTTATGACCGGTGGAATGTCACTTGGTCAGACATCCCCTAGCCTAAATGCATTTGCAGCAGGGCAAGCAGCAGCATATAAGATGTTTGAGACAATAAAAAGAAAGCCCAAAATTGATGCTTATGACACTAGTGGTGTCGTCTTGGAAGACATAGAGGGAGACATTGAACTCAAAGATGTTTACTTCAGATACCCTGCTAGGCCAGATGTGCAAATCTTTGCTGGATTCTCATTGCATGTTCCAAGTGGCACAACTGCTGCTTTGGTGGGTCAAAGTGGAAGTGGCAAGTCCACTGTAATAAGTTTATTAGAAAGATTCTATGATCCTGATGCTGGAGAAGTACTCATAGATGGTGTAAACATGAAGAATTTCCAACTTAGATGGATTAGAGAACAGATTGGGCTGGTTAGTCAGGAGCCTACCCTTTTCACAGCTAGTATCAAAGAGAACATAGCTTATGGTAAAGAAGGCGCAACTGATGAGGAGATAGTAACAGCAATAACACTTGCCAATGCCAAAAAGTTCATTGACAAGCTACCTCAGGGACTTGACACAATGGCAGGGGAGCATGGGACTCAACTTTCTGGTGGGCAAAAGCAAAGAATTGCCATAGCAAGGGCAATTCTGAAGAACCCAAAAATCCTGCTTCTAGATGAAGCAACAAGTGCATTAGATGCTGAATCTGAACGCATTGTTCAAGAAGCGTTAGAAAAAGCCATGTCAAATAGGACCACTGTAGTTGTCGCACATCGTCTGACAACTATTAGAAATGCTGACACCATAGCAGTTGTTCATCAAGGGAAAATTGTGGAAAAAGGGACTCATGATGAGTTAATCAAGGACCCTGATGGTGCTTATTCTCAGCTTATTCGCATACAAGAAGGACAACAGGAAGGTGAAGGTGGCCAAAATTCTGAAGGAGACAAGCCAAGCAACAGTTTCAATTTAGATAGACCTTCCTCCATCCAGAGAACGTCCCATCTTAGATCATTAAGCCGAGATTCATCTGGGAGGAGACACTCACAAGGCTCTCCTCTTTTTCCTTTCCAAAGTTCTACACACCAGCCAGGAGAAGGAGCAGATGGGGATATTGAGTGTGGTAAACGTGATCATGTGAAGCCCAAAAGCGTTTCAATAAAACGTTTGGCCTATTTGAACAAGCCTGAGGTTCCTGTGTTGCTGCTTGGATCCATTGCTGCAGCAGTGCATGGAGTGGTGTTCCCTATGTTTGGCCTCTTGCTTTCATCAGCTATTACCATGTTCTTTGAGCCTCCACACCAGCTGAGGAAGGATTCTCGGTTCTGGTCACTTTTGTATGTGGGTTTGGGCTTGATTACCCTTGTGGCTATACCAGTGCAGAATTACTTCTTTGGGATAGCTGGCGGAAAACTCATTGAAAGGATTCGCTCATTGACATTTCAAAAGGTTGTTCACCAACAGATCAGTTGGTTTGATGATCCTGCAAATTCAAGTGGTGCAGTTGGTGCAAGGTTATCTACCGATGCTTCAACAGTGAGGAGTCTCGTTGGTGACACCATGGCCCTCATTGTGCAAAACATATCAACAATCACATCAGGTCTTGTTATAGCTTTCACTGCAAACTGGATTCTGGCTTTTATAATTCTGGCTGTGTCACCCTTGGTCCTCTTGCAAGGATTCCTTCAGATGAGGTTCCTAAAAGGATTCAGTGCTGATGCCAAGTTGATGTATGAAGAGGCAAGTCAGGTGGCAAATGATGCTGTTGGCAGCATCAGAACCGTTGCATCATTTTGTGCAGAACCAAAGGTTATGGATATGTACAGGAAGAAGTGTATAGGGCCAGAAAAACAAGGTGTTCGGTTGGGGCTTGTTAGTGGTGCAGGATTTGGTTTCTCATTTTTGGCTCTATACTGCACAAATGCTTTCTGTTTCTACATAGGATCTGTCCTTGTGCAACATGGGAAAGCAACCTTTTCAGAGGTTTTCAAGGTTTTCTTTGCCTTGACAATCTCAGCAATAGGTGTTTCTCAGACTACTGCCTTGGCACCTGACACAAACAAGGCCAAAGATTCCACAGCTTCGATATTTGAAATTCTTGACAGCAAACCTGCCATTGACTCCAGCAGCAATGAAGGCATAACACTAGAAACCGTAAAAGGTGACATTGAACTTCAACATGTCAGCTTTTGTTACCCAACAAGGCCTCATATTCAAATTTTCAAAGATTTGTGTCTAAGCATCCCAGCTGGGAAGACCGTTGCCTTGGTTGGAGAAAGTGGCAGTGGAAAATCAACAGTGATAAGCCTCTTAGAGAGATTCTACAACCCTGATTCCGGGCATATACTACTAGATGGAGAGGATATCACAAAGCTTAGAATAAGCTGGTTGAGGCAGCAAATGGGGTTGGTTGGTCAGGAGCCAATTCTTTTCAATGAAAGCATACGTGCCAACATATCATATGGCAAAGAAGGTGGTGCCACTGAGGAAGAGGTAATTGCATCAGCCCAATCAGCCAATGCGCACAAGTTCATAAGCTCTCTTCCAAATGGATATGACACTTCTGTTGGGGAAAGAGGGACACAGTTATCTGGTGGACAAAAGCAGCGTATAGCCATTGCAAGGGCCATGCTGAAACAGCCTAAAATACTGTTGCTTGATGAGGCAACAAGTGCACTTGATGCTGAGTCAGAGCGTGTGGTTCAAGAGGCTCTAGATAGAGTGAGTGTGGACAGAACTACTGTGGTGGTGGCTCACAGGCTTTCAACAATCAGAGGTGCTGACATCATAGCAGTGGTGAAGAATGGGGTGATTGCTGAGAAGGGAAGGCATGATGCTTTGATGAAGATTGAGGGTGGAACTTATGCTTCATTGGTTGCTCTACATATTAGTGCATCATGA 3195 0.4379 MSMMMAKMSSRGQIAYAEAGNVVEQTVGAIRTVASFTGEKKAIEKYNSKLKVAYATMVQQGMASGIGMGVLLLIIFSTYGLAMWYGSKLIIEKGYQGGTVINVIIALMTGGMSLGQTSPSLNAFAAGQAAAYKMFETIKRKPKIDAYDTSGVVLEDIEGDIELKDVYFRYPARPDVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLLERFYDPDAGEVLIDGVNMKNFQLRWIREQIGLVSQEPTLFTASIKENIAYGKEGATDEEIVTAITLANAKKFIDKLPQGLDTMAGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALEKAMSNRTTVVVAHRLTTIRNADTIAVVHQGKIVEKGTHDELIKDPDGAYSQLIRIQEGQQEGEGGQNSEGDKPSNSFNLDRPSSIQRTSHLRSLSRDSSGRRHSQGSPLFPFQSSTHQPGEGADGDIECGKRDHVKPKSVSIKRLAYLNKPEVPVLLLGSIAAAVHGVVFPMFGLLLSSAITMFFEPPHQLRKDSRFWSLLYVGLGLITLVAIPVQNYFFGIAGGKLIERIRSLTFQKVVHQQISWFDDPANSSGAVGARLSTDASTVRSLVGDTMALIVQNISTITSGLVIAFTANWILAFIILAVSPLVLLQGFLQMRFLKGFSADAKLMYEEASQVANDAVGSIRTVASFCAEPKVMDMYRKKCIGPEKQGVRLGLVSGAGFGFSFLALYCTNAFCFYIGSVLVQHGKATFSEVFKVFFALTISAIGVSQTTALAPDTNKAKDSTASIFEILDSKPAIDSSSNEGITLETVKGDIELQHVSFCYPTRPHIQIFKDLCLSIPAGKTVALVGESGSGKSTVISLLERFYNPDSGHILLDGEDITKLRISWLRQQMGLVGQEPILFNESIRANISYGKEGGATEEEVIASAQSANAHKFISSLPNGYDTSVGERGTQLSGGQKQRIAIARAMLKQPKILLLDEATSALDAESERVVQEALDRVSVDRTTVVVAHRLSTIRGADIIAVVKNGVIAEKGRHDALMKIEGGTYASLVALHISAS* 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0633 1064 CDD ABC_6TM_Pgp_ABCB1_D2_like 489 804 - -
Dod03g0633 1064 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 161 397 IPR003439 GO:0005524
Dod03g0633 1064 SUPERFAMILY ABC transporter transmembrane region 3 145 IPR036640 GO:0005524|GO:0016021
Dod03g0633 1064 Gene3D - 811 1059 IPR027417 -
Dod03g0633 1064 Gene3D - 151 400 IPR027417 -
Dod03g0633 1064 MobiDBLite consensus disorder prediction 402 436 - -
Dod03g0633 1064 ProSitePatterns ABC transporters family signature. 300 314 IPR017871 GO:0005524
Dod03g0633 1064 MobiDBLite consensus disorder prediction 402 475 - -
Dod03g0633 1064 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 500 786 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod03g0633 1064 Pfam ABC transporter transmembrane region 500 771 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod03g0633 1064 Pfam ABC transporter transmembrane region 3 111 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod03g0633 1064 Gene3D ABC transporter type 1, transmembrane domain 2 406 IPR036640 GO:0005524|GO:0016021
Dod03g0633 1064 CDD ABC_MTABC3_MDL1_MDL2 161 397 - -
Dod03g0633 1064 SUPERFAMILY ABC transporter transmembrane region 481 802 IPR036640 GO:0005524|GO:0016021
Dod03g0633 1064 Pfam ABC transporter 840 989 IPR003439 GO:0005524
Dod03g0633 1064 SMART AAA_5 848 1041 IPR003593 -
Dod03g0633 1064 SMART AAA_5 188 374 IPR003593 -
Dod03g0633 1064 Gene3D ABC transporter type 1, transmembrane domain 480 788 IPR036640 GO:0005524|GO:0016021
Dod03g0633 1064 Gene3D ABC transporter type 1, transmembrane domain 789 810 IPR036640 GO:0005524|GO:0016021
Dod03g0633 1064 Pfam ABC transporter 182 328 IPR003439 GO:0005524
Dod03g0633 1064 CDD ABC_MTABC3_MDL1_MDL2 821 1057 - -
Dod03g0633 1064 ProSitePatterns ABC transporters family signature. 961 975 IPR017871 GO:0005524
Dod03g0633 1064 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 1061 IPR039421 -
Dod03g0633 1064 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 810 1058 IPR027417 -
Dod03g0633 1064 MobiDBLite consensus disorder prediction 443 463 - -
Dod03g0633 1064 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 821 1058 IPR003439 GO:0005524
Dod03g0633 1064 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 1 1061 - -
Dod03g0633 1064 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 126 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod03g0633 1064 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 399 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0633 Dod-Chr3 7804050 7808156 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0633 3 399 Calmodulin-binding Proteins AT2G36910 45.865 3.79e-105 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0633 K05658 - gmx:100801771 1695.63