Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0630 ATGTCCACGGTGATGGCTAAAGTGTCAAGTCGTGGCCAAATTGCTTATGCAGAAGCCGGAAATCTTGTTGAACAAACAGTTGGAGCCATTAGAACAGTAGCATCTTTTACTGGCGAGAAGAAAGCAATAGAACACTATAATAGCAAGTTAAGAGTTGCCTACACTGCAATGGTTCAACAGGGAATAGCTTTAGGGTTGGGAATGGGAGTGCTTCTTTTTATTGTCTTCAGCACCTATGGACTTGCCGTGTGGTATGGTGCCAAACTGATCATTGAGGAAGGTTACAATGGTGGAACCGTCATGAATGTGATCATAGCTATTATGACCGGTGGAATGTCTCTAGGTCAGATATCCTCTAGCCTAAATGCATTTGCTGTAGGCCAAGCAGCAGCATATAAGATGTTTGAGACAATAAAAAGAAAGCCCAAAATTGATGCTTATGACACCAGTGGGGTTGTCTTGGAAGACATAAAGGGAGACGTTGAACTCAAAGATGTTTACTTCAGATACCCTTCTAGGCCAGATGTGCAGATCTTTGCTGGATTCTCATTGCATGTTCCAAGTGGCACTACTGCTGCTTTGGTGGGTCAGAGTGGAAGTGGCAAGTCCACTGTAATAAGTTTATTAGAAAGATTCTATGATCCTGATGCTGGAGAAGTACTCATAGATGGTGTAAACTTGAAGAATTTCCAACTTAGATGGATTAGAGAACAGATTGGACTGGTTAGTCAAGAACCTGTCCTTTTTACAGCCAGTATCAAAGAGAACATAGCTTATGGGAAAGAAGGTGCAACTGATGAGGAGATAACAATAGCAATAATGCTTGCCAATGCTAAAACTTTCGTTGACAAGCTGCCACAGGGTCTTAACACTATGGCGGGGGAGCGTGGGACTCAGCTTTCTGGTGGGCAAAAGCAAAGACTTGCCATAGCAAGAGCAATTCTGAAGAACCCAAAAATCCTGCTTCTTGATGAAGCCACAAGTGCATTAGATGCTGAGTCTGAACGAATTGTTCAAGAAGCGTTAGAAAAAGTCATGTCAAACAGGAGCACTATAGTTGTTGCACATCGTTTGACTACCATCAGAAATGTTGACACCATAGCAGTGGTTCATCAGGGGGAAATTGTGGAGAAAGGCACTCATGATGAGTTAATCAAGGACCCTCATGGTGCTTATTCTCAGCTTATTCACTTACAAGAAGGACAAAATGAAAGTGAAGGTGGCCGGAATTCTGAAGCAGACCAGTCAAGCAACAGTTTCAGTTTAGATATACCTTCCACCCAGGGAACAACCAATCTGAGATCACTGAGCTCCGAAAGAGCTGATGTAGATATAAAAATCAGTGAACGTGATCATGAGAAGCCCAAAAATGTTTCTATAAAACGTTTGGCCTATTTGAACAAGCCTGAGGTACCTGTCTTACTGCTTGGATCCATTGCTGCAGCAATACGTGCTGTTGTGTTCCCAATATTTGGCCTCTTGCTTTCATCAGCAGTTAACATGTTCTTTAAACCTCCACATCAGCTGCTGAAGGATTCTAGGTTCTGGTCACTCTTCTATGTGGGTTTGGGTTTGGTTCCTCTTAATTACTTCTTTGGGATTGCTGGTGGAAGACTCATTGAAAGGATTCGGTCACTGACATTTCAAAAGGTTGTGCACCAACAAATCAGTTGGTTTGATGATCCTGCAAATTCAAGGTCTAATTGGATTCTGGCTTTTATAATTCTGGCTGTGTCACCTGTGGTCCTGATGCAAGGATTCCTTCATATGAAGTTTCTAAAAGGATTCAGTGCTGATGCCAAGTTGCTGTATGAAGAGGCAAGTCAGGTAGCATATGATGCTGTTGGCAGCATCAGAACCGTTGCATCATTTTGTGCAGAGCCAAAGGTGATGGCCATGTACAAATTTAAGTGTACAGGGCCGGAAAAACAAGGTGTTCGGGTGGGGCTTGTTAGTGGTGCAGGATATGGTTTTTCTCTTTTCGCTCTATACTGCACATTTGCTTTCTGTTTCTACATAGGATCTGTTCTTGTGCAACACAGAAAAGCAAACTTCTCAGAGGTGTTCAAGGTTTTCTTTTCTTTAACAATTACAGCAATTGGTGTTTCCCAGACTAGTGCCTTGGCACCAGACACTAACAAGGCCAAAGATTCTGCAGCTTCGATATTTGAAATTCTTGACAGCAAACCAGTGATTGACTCCAGCAGCAATGAGGGTATAACACTAGACACCATAGCTGGTGATATTGAACTTCAACATGTCTGCTTTAGTTATCCTACAAGGCCTCATATTCAAATTTTCAAAGATTTGTGTCTAAACATCCCAGCTGGAAATACGGTTGCCTTGGTTGGAGAGAGTGGCAGTGGAAAATCAACAGTTATAAGCCTCTTAGAGAGATTCTACAACCCTGATTCTGGGCATATACTACTAGACGGAGTGGATATCACAAAGTTCAGAATAAGCTGGTGGAGGCAGCAAATAGGTTTGGTTGGTCAAGAGCCCATTCTTTTCAATGAAAGCATTCATGCCAACATAGCATATGGCAACGAGGGTGGTGCCACTGAGGAGGAGATAATTGCAGCAGCTCAAGCAGCCAATGCACACGAGTTCATAAGCTCTCTTCCAAGTGGATATGACAATTCTGTTGGGGAAAGAGGGACACAGTTATCTGGTGGACAAAAGCAGCGTATAGCCCTTGCAAGGGCCATGCTTAAAGAGCCCAAAATACTGTTGCTTGATGAGGCAACAAGTGCACTTGATGCTGAGTCAGAGCGTGTGGTTCAAGAGGCTCTAGATAGAGTGAGTGTGGGCAGAACCACTGTGGTGGTAGCTCACAGGCTATCAACAATCAAAGGTGCTGACATCATAGCAGTGGTGAAGAATGGGGTGATTGCTGAGAAGGGAAGGCATGATGCTTTGATGAAGATTGAGTATGGAACTTATGCTTCATTGGTAGCTCTGCATATGAGTGCATCATAA 2979 0.4317 MSTVMAKVSSRGQIAYAEAGNLVEQTVGAIRTVASFTGEKKAIEHYNSKLRVAYTAMVQQGIALGLGMGVLLFIVFSTYGLAVWYGAKLIIEEGYNGGTVMNVIIAIMTGGMSLGQISSSLNAFAVGQAAAYKMFETIKRKPKIDAYDTSGVVLEDIKGDVELKDVYFRYPSRPDVQIFAGFSLHVPSGTTAALVGQSGSGKSTVISLLERFYDPDAGEVLIDGVNLKNFQLRWIREQIGLVSQEPVLFTASIKENIAYGKEGATDEEITIAIMLANAKTFVDKLPQGLNTMAGERGTQLSGGQKQRLAIARAILKNPKILLLDEATSALDAESERIVQEALEKVMSNRSTIVVAHRLTTIRNVDTIAVVHQGEIVEKGTHDELIKDPHGAYSQLIHLQEGQNESEGGRNSEADQSSNSFSLDIPSTQGTTNLRSLSSERADVDIKISERDHEKPKNVSIKRLAYLNKPEVPVLLLGSIAAAIRAVVFPIFGLLLSSAVNMFFKPPHQLLKDSRFWSLFYVGLGLVPLNYFFGIAGGRLIERIRSLTFQKVVHQQISWFDDPANSRSNWILAFIILAVSPVVLMQGFLHMKFLKGFSADAKLLYEEASQVAYDAVGSIRTVASFCAEPKVMAMYKFKCTGPEKQGVRVGLVSGAGYGFSLFALYCTFAFCFYIGSVLVQHRKANFSEVFKVFFSLTITAIGVSQTSALAPDTNKAKDSAASIFEILDSKPVIDSSSNEGITLDTIAGDIELQHVCFSYPTRPHIQIFKDLCLNIPAGNTVALVGESGSGKSTVISLLERFYNPDSGHILLDGVDITKFRISWWRQQIGLVGQEPILFNESIHANIAYGNEGGATEEEIIAAAQAANAHEFISSLPSGYDNSVGERGTQLSGGQKQRIALARAMLKEPKILLLDEATSALDAESERVVQEALDRVSVGRTTVVVAHRLSTIKGADIIAVVKNGVIAEKGRHDALMKIEYGTYASLVALHMSAS* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0630 992 SMART AAA_5 188 374 IPR003593 -
Dod03g0630 992 SMART AAA_5 776 969 IPR003593 -
Dod03g0630 992 ProSitePatterns ABC transporters family signature. 300 314 IPR017871 GO:0005524
Dod03g0630 992 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 738 986 IPR027417 -
Dod03g0630 992 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 399 IPR027417 -
Dod03g0630 992 SUPERFAMILY ABC transporter transmembrane region 3 145 IPR036640 GO:0005524|GO:0016021
Dod03g0630 992 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 475 714 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod03g0630 992 CDD ABC_6TM_Pgp_ABCB1_D2_like 464 732 - -
Dod03g0630 992 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 567 989 - -
Dod03g0630 992 ProSitePatterns ABC transporters family signature. 889 903 IPR017871 GO:0005524
Dod03g0630 992 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 749 986 IPR003439 GO:0005524
Dod03g0630 992 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 1 565 - -
Dod03g0630 992 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 161 397 IPR003439 GO:0005524
Dod03g0630 992 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 567 989 IPR039421 -
Dod03g0630 992 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 565 IPR039421 -
Dod03g0630 992 CDD ABC_MTABC3_MDL1_MDL2 749 985 - -
Dod03g0630 992 Gene3D ABC transporter type 1, transmembrane domain 2 566 IPR036640 GO:0005524|GO:0016021
Dod03g0630 992 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 125 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod03g0630 992 SUPERFAMILY ABC transporter transmembrane region 454 733 IPR036640 GO:0005524|GO:0016021
Dod03g0630 992 MobiDBLite consensus disorder prediction 401 435 - -
Dod03g0630 992 Gene3D ABC transporter type 1, transmembrane domain 569 738 IPR036640 GO:0005524|GO:0016021
Dod03g0630 992 Pfam ABC transporter transmembrane region 475 564 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod03g0630 992 Pfam ABC transporter transmembrane region 5 111 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod03g0630 992 Pfam ABC transporter transmembrane region 567 699 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod03g0630 992 CDD ABC_MTABC3_MDL1_MDL2 161 399 - -
Dod03g0630 992 Pfam ABC transporter 182 328 IPR003439 GO:0005524
Dod03g0630 992 Pfam ABC transporter 768 917 IPR003439 GO:0005524
Dod03g0630 992 Gene3D - 739 988 IPR027417 -
Dod03g0630 992 Gene3D - 151 400 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0630 Dod-Chr3 7754703 7765958 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0630 569 991 Calmodulin-binding Proteins AT2G36910 47.642 4.34e-118 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0630 K05658 - gmx:100801771 1489.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0630 03 7754703 7765958 Dod03g0630 03 7754703 7765958 ECH