Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0613 ATGGAATCGAAAAATCCTTCGAGGTTCACGCTGTTGAAGCAGTCATCGATGGCACCAGAACGAGACAGAGGAGAAGAAAAAGAATCGGAGCTGCAGAATGGTGGGGAGGCAGAGGAAGGTGTTGATCCAGGTGTGAGGCTGATGTATTCGGCAAACGAGGGCGATCTTGATGGGATCCGCGAGGTGTTGGAGTCAGGTGTTAGTGTTAACTTCAGAGACATTGATGACCGCACTGCCCTTCATGTTGCTGCCTGTCAGGGCTTGACCGATGTGGTTGCCTTGTTGTTAGAGAAAGGTGCTGAGGTCGACGCCAAAGATCGATGGGGCAGTACGCCACTTGCAGATGCTATATTTTATAAAAACAATGACGTCATCAAACTATTGGAGAAGCATGGAGCAAAGCTTCCGATGGCACCCATGCATGTTGATCATGCACGCGAAGTCCCAGAATATGAAATCAACCCTAAAGAACTTGATTTTACCAACAGTGTGGAGATAACAAAGGGGACCTTCTGTAGTGCATTCTGGCGTGGGACAGAGGTTGCAGTAAAAAAGCTCAGCGAGGATGTAATTTCTAATGAGGAGAAAGTGAAGGCCTTTAGGGATGAGCTTGCTCTGTTCCAGAAGATCCGGCATCCAAATGTAGTCCAGTTTCTGGGTGCTGTGACCCAGAGTAGTCCAATGATGATTGTGACAGAATATCTTCCCAAGGGAGATCTTCGTGATTTCTTGCAAAGAAAAGGATATTTGAAACCATCAACAGCTGTGAGATTTGCACTTGATATTGCTAGGGGAGTGGGTTATTTGCATGAAAATAAGCCATCACCCATTATTCACCGCGATCTTGAGCCTTCTAATATATTGCGGGATGACTCTGGACACCTAAAAGTTGCAGACTTTGGGGTTAGCAAGTTGCTGGCAGTTAAAGAAGACAGGCCTCTAACTTGCCAAGATACTTCTTGTCGCTATGTGGCTCCTGAGGTTTTCAAACAAGAAGAATATGACACCAAAGTGGATGTATTCTCATTTGCACTAATCCTGCAAGAGATGATTGAAGGCTGCCCACCGTTTTCTGCAAAGCAAGACAATGAGGTTCCTAAGGTATATGCCGCAAAAGAGCGTCCACCTTTTCGAGCTCCAGCCAAGCGTTATGCTCATGGAATTAGAGAATTGATCGAAGAGTGCTGGAATGAAACTCCTGCAAAGAGACCAACATTTAGGCAAATAATACCAAAGCTGGAATCCATCTACAACACTATTGGTCAAAAAAGACATTGGAAGGTATTTTGTCCAACCTGGCATTTGTCAAAAGTTTGTAGACTGGGCTGCATGATTAATCTTGGTTTATCAAAATGCCATATTTTACTGATGAAAGTAACTATTAAATGGGGGGGGGGGGGTAAAAACTGTTTTATGTTTTTGGATTTATTAAAGGAAATATATAGCATGATAAATAATGTATGA 1464 0.4378 MESKNPSRFTLLKQSSMAPERDRGEEKESELQNGGEAEEGVDPGVRLMYSANEGDLDGIREVLESGVSVNFRDIDDRTALHVAACQGLTDVVALLLEKGAEVDAKDRWGSTPLADAIFYKNNDVIKLLEKHGAKLPMAPMHVDHAREVPEYEINPKELDFTNSVEITKGTFCSAFWRGTEVAVKKLSEDVISNEEKVKAFRDELALFQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRDFLQRKGYLKPSTAVRFALDIARGVGYLHENKPSPIIHRDLEPSNILRDDSGHLKVADFGVSKLLAVKEDRPLTCQDTSCRYVAPEVFKQEEYDTKVDVFSFALILQEMIEGCPPFSAKQDNEVPKVYAAKERPPFRAPAKRYAHGIRELIEECWNETPAKRPTFRQIIPKLESIYNTIGQKRHWKVFCPTWHLSKVCRLGCMINLGLSKCHILLMKVTIKWGGGGKNCFMFLDLLKEIYSMINNV* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0613 487 PRINTS Tyrosine kinase catalytic domain signature 232 245 IPR001245 GO:0004672|GO:0006468
Dod03g0613 487 PRINTS Tyrosine kinase catalytic domain signature 271 289 IPR001245 GO:0004672|GO:0006468
Dod03g0613 487 PRINTS Tyrosine kinase catalytic domain signature 384 406 IPR001245 GO:0004672|GO:0006468
Dod03g0613 487 PIRSF ILK 1 435 - -
Dod03g0613 487 SMART ANK_2a 39 71 IPR002110 GO:0005515
Dod03g0613 487 SMART ANK_2a 75 104 IPR002110 GO:0005515
Dod03g0613 487 SMART ANK_2a 108 137 IPR002110 GO:0005515
Dod03g0613 487 MobiDBLite consensus disorder prediction 18 34 - -
Dod03g0613 487 CDD STKc_MAP3K-like 166 413 - -
Dod03g0613 487 Gene3D Transferase(Phosphotransferase) domain 1 147 429 - -
Dod03g0613 487 Pfam Protein tyrosine and serine/threonine kinase 174 413 IPR001245 GO:0004672|GO:0006468
Dod03g0613 487 ProSiteProfiles Ankyrin repeat region circular profile. 75 107 - -
Dod03g0613 487 SUPERFAMILY Protein kinase-like (PK-like) 163 413 IPR011009 -
Dod03g0613 487 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 441 - -
Dod03g0613 487 ProSiteProfiles Ankyrin repeat profile. 75 107 IPR002110 GO:0005515
Dod03g0613 487 SUPERFAMILY Ankyrin repeat 46 137 IPR036770 -
Dod03g0613 487 Coils Coil 183 203 - -
Dod03g0613 487 Gene3D - 11 146 IPR036770 -
Dod03g0613 487 Pfam Ankyrin repeats (3 copies) 47 135 IPR002110 GO:0005515
Dod03g0613 487 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 9 441 - -
Dod03g0613 487 ProSiteProfiles Protein kinase domain profile. 160 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0613 487 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0613 Dod-Chr3 7480971 7487613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0613 2 436 MAP Kinase Kinase Kinase AT4G18950 69.195 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Dod03g0613 PK_Tyr_Ser-Thr 1.7e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0613 - - gmx:100790126 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0613 03 7480971 7487613 Dod03g0613 03 7480971 7487613 ECH