Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0588 ATGATGAAGTGGGGAAGAAGAAAAACTTCTTCTGCTTCTGGGCCTTCTACTTTCTTGTCTCGTCCTTCTCTTTTTTCATGGCTGTCCAAGTTCAAGCACATGAGAGTCAACTCAGAGCCAAATCATGGAAAGATGAAGCAGAATGCAAAGAAGAATTCTACTACATCTGTTGGTTCTTCACCACAGTCTTCTTGTGGGAATGGAGTTGGATTCCATGTGGGGGATGGTGACGCTTTATGGAGAACAAGACCATCATTTGGGGATGAGAGTCATGTGGATAAGAAAAGTGAAGAAGATGTTGATGTAAGTGCTATTCCATCCTCAAGTTTTCCTAATGGTAGGAGTAGAAGGAATGCAAAGAAACATGGAACAAGAGAAGGCACTCTAAAGTTCAAAGAGAAGGATATTGGTCTAGGTCTTGGTCTAGGAGAAGAAAGAAAATTGCTGGATGATAGGAAGGTTTCACTGAAGATGGTTGAGTACAATAGAGGAAAGGAATATGAACCCTTAAGGAGCAGATTTGAGAGGAAAGTTTTGCAAGAGCAACTGTTGAAGTTAGAAAGAGATCAAGCAGCGGAAGAAGTTGAACTAGCATCAAGTAAAGTACAAGAAAAAAATGTGCTGCAACTTGAATCACCTAGAACAATTTGCACACCAAGAACACACTGCTTTGCATCTTTTGCAGATTCAAGTGGTTCTAACTATAAAGTTAGAAGTATAGTAGATTGCTATGAGAAAGCTGGGAGGCAGTCTCAGAAGAAATCGAGTTCTGATCAGAGGCAGAATTTGAAACAAACTGAGGGGTTGAATGTGAAGATCACCAACAAAAAGATCAGGCAAACACTTGATGTCAGCAGAGAACCCCAGAGAAGGAAACCAAAGCACAGTCCCAGGTTCAGAATATATTCTCCAAGGATGGCTTCCAAGGTTGAAGTTTGCAGAATAAAGGCTCTAGAAGACATGAGGAAAGCCAAACTAAAGATGATCAGGAAAGAAATAGAGGAGGAAGTTGTGGAGGGAACACAAGGCTCAGATAGCTTTGCTGTGATTAAATGTTCATCAGATCCAAAGCAAGATTTCAGAGACTCAATGATTGAGATGATCATGGAGAAGCAGATTAGACATCCAGAAGAAATGGAAGAACTGCTGGCATGCTACCTGACCTTGAATGCTCATGAGTATCATGATCTCATCATCAAAGTGTTCAGGCAGGTGTGGTTTGAGTACATGAGCCAAGATGGTTCTTGCTGTGAGTAA 1257 0.4113 MMKWGRRKTSSASGPSTFLSRPSLFSWLSKFKHMRVNSEPNHGKMKQNAKKNSTTSVGSSPQSSCGNGVGFHVGDGDALWRTRPSFGDESHVDKKSEEDVDVSAIPSSSFPNGRSRRNAKKHGTREGTLKFKEKDIGLGLGLGEERKLLDDRKVSLKMVEYNRGKEYEPLRSRFERKVLQEQLLKLERDQAAEEVELASSKVQEKNVLQLESPRTICTPRTHCFASFADSSGSNYKVRSIVDCYEKAGRQSQKKSSSDQRQNLKQTEGLNVKITNKKIRQTLDVSREPQRRKPKHSPRFRIYSPRMASKVEVCRIKALEDMRKAKLKMIRKEIEEEVVEGTQGSDSFAVIKCSSDPKQDFRDSMIEMIMEKQIRHPEEMEELLACYLTLNAHEYHDLIIKVFRQVWFEYMSQDGSCCE* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0588 418 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 348 408 IPR006458 -
Dod03g0588 418 MobiDBLite consensus disorder prediction 47 67 - -
Dod03g0588 418 MobiDBLite consensus disorder prediction 254 270 - -
Dod03g0588 418 Pfam Transcriptional repressor, ovate 353 408 IPR006458 -
Dod03g0588 418 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 12 409 IPR038933 GO:0045892
Dod03g0588 418 MobiDBLite consensus disorder prediction 248 270 - -
Dod03g0588 418 ProSiteProfiles OVATE domain profile. 349 408 IPR006458 -
Dod03g0588 418 MobiDBLite consensus disorder prediction 36 68 - -
Dod03g0588 418 Coils Coil 176 196 - -
Dod03g0588 418 MobiDBLite consensus disorder prediction 1 21 - -
Dod03g0588 418 PANTHER TRANSCRIPTION REPRESSOR OFP4 12 409 - -
Dod03g0588 418 MobiDBLite consensus disorder prediction 82 128 - -
Dod03g0588 418 MobiDBLite consensus disorder prediction 82 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0588 Dod-Chr3 7107777 7109033 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dod03g0588 Ovate 8.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0588 - - gmx:102666239 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0588 03 7107777 7109033 Dod03g0588 03 7107777 7109033 ECH
Dod04g2189 04 45490106 45491494 Dod03g0588 03 7107777 7109033 PCT