Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0574 ATGGGAGCAGTAACTGAAGGAATCCGCAGCAAGAAGAAGTCATCAAGAGGGCACCACAGGTTTGTAGGTGTTCGACAAAGGCCATCAGGAAGATGGGTGGCAGAGATCAAGGACTCTTTGCAGAAGGTTAGGCTTTGGCTTGGAACATTTGACACCGCAGAAGATGCAGCTCGTGCATATGATACAGCTGCTAGAGCCTTAAGAGGTGCAAATGCTAGGACTAACTTTGAATTGCCGGAGTCTGCAGCCTCTGGTGGTGGTGCCAGCAAGCGTGGTGGTGGTGCCAGCAAGCGTGGTGCTGTTTCCAACTTCATGCCAGATAACCCTGAGCCCTTTTCATTTGAGGATGCCAATGAGGCAGTGGCGGATGGGGATGGCCTTCTTGGTGCACTCAAGGCCAAGCTTTTTGATGGAAAGGGTGGAGGGAGGTTCCCACTTCGTGCTCATTGTGCTGCCCCGGTTGTTCAATCTAGTATGGTTTCAAGATCAACTCAGAACTGTTATGGGAAGATGAAAGAGTTATCATCACCACCTGCACCTGCACCTGCACCGGCACTAGTCCCTTGGACGATTAATGATGTAATTGGCAACAATAATACTTTGCCTGGTTTGATCAGTACTTCATCAGATACTTCTGGTAAGGGTGTGCTTTTCCCAAATCATGATCATGAAGGAGGTGTTACAAGCAGTGCTGGTGGAGCCAATGATAACACTTATCAACTTTGTCAGACACCACCCTTGACATGGTCCAATGAAATAGCATATGAATTGCCTTGGCCTAATCAGAAGAGCCAGGTTCCTGAAAATAGCTTGCTTGCATCTTCAAGCACAGCCACCTTTACATGGCCCCTTTCTGGGGTAAATGAGACCACTGTTGATATGACATACACGGATCCGGGGCCATCAAGTAGCAGCAGGAGTGGACAGATGAATGTGGTGAGCATGCAATTGCCTTTGCCTCTAGTTGGTGGAGCAACAGAAGGATTTTGGACAGTGGAGCAGCAACAATTTGATCAGTGTGAGAACAGCACTTGGTTTAGTTCTAATAGCCCTTGGGATCCTCTCCTCTATATGCCTTCTGACCTATAG 1089 0.4821 MGAVTEGIRSKKKSSRGHHRFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDTAEDAARAYDTAARALRGANARTNFELPESAASGGGASKRGGGASKRGAVSNFMPDNPEPFSFEDANEAVADGDGLLGALKAKLFDGKGGGRFPLRAHCAAPVVQSSMVSRSTQNCYGKMKELSSPPAPAPAPALVPWTINDVIGNNNTLPGLISTSSDTSGKGVLFPNHDHEGGVTSSAGGANDNTYQLCQTPPLTWSNEIAYELPWPNQKSQVPENSLLASSSTATFTWPLSGVNETTVDMTYTDPGPSSSSRSGQMNVVSMQLPLPLVGGATEGFWTVEQQQFDQCENSTWFSSNSPWDPLLYMPSDL* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0574 362 Pfam AP2 domain 20 69 IPR001471 GO:0003700|GO:0006355
Dod03g0574 362 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Dod03g0574 362 SUPERFAMILY DNA-binding domain 21 77 IPR016177 GO:0003677
Dod03g0574 362 CDD AP2 20 77 IPR001471 GO:0003700|GO:0006355
Dod03g0574 362 Gene3D AP2/ERF domain 19 78 IPR036955 GO:0003700|GO:0006355
Dod03g0574 362 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 2 358 - -
Dod03g0574 362 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Dod03g0574 362 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Dod03g0574 362 MobiDBLite consensus disorder prediction 78 101 - -
Dod03g0574 362 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP 2 358 - -
Dod03g0574 362 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0574 Dod-Chr3 6815994 6817082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0574 9 76 AP2-EREBP Transcription Factor Family AT5G19790 69.118 5.74e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod03g0574 AP2 6.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0574 - - gmx:102661478 384.415