Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0573 ATGACGACTTGTGATGAGTGGAAACCTTTTGTAGTAATGATAGCAATTGATTTTTCTTTTGCGGCAGTGAATGTTATTCTCAAGAAAGTCCTTCAAGAAGGAATGAACCATTTGGTTTTTATCACATACCGGCTTTCAATTGCTACCATTCTCTTAGCCCCAGTCGGCTACTTTCGGGAAAGAAACAGCAGGCCACAGCTCACATTTCGAGTTCTATGTTACCTCTTCGTCAGTGCCATTGTTGGGGCATCAGTCACGCAATACTTTTTCCTTCTGGGGATCCAATACACTTCTGCTACCTTTGCTTGCGCCTTCATTAATATAGTGCCTGCAACCACATTCATCATGGCATTACCATTTGGGATAGAGACTGTGAACATCAAGAGCAACAGTGGGAGAGCTAAGATTTTTGGCACATTGGTGTGCATAGGTGGAGCATTGTTGTTAACACTCTACAAAGGACAACCCTTGTTTAACTATTCTCACTATAAGTCATTGGCTCCAGTAGCCAAGAATTCTGCAGTGATGCTATCTTCTACAAGAACAACTAGGAGGTGGACCATTGGTGTGGTAGCTTTGATTCTTGGAACCCTCTTTTGGTCTTCTTGGTTTATTTTACAATCAAGCATAAGCAAGAGATTCCCGTGTCAGTATTCTAGCACAGCCATCATGACCTTCTTTGGAGCCATTCAAGCAGCTGTCATTGGCTTGTCCACTGAGCACAATAACTTGTCCGTTTGGGTTCTCAGGGGGAAGATTGAATTGATAGCTGTTGTGTTCTCTGGGATGATTGGATCGGGTTTGTGTTTTGTGGGCATGTCATGGTGTGTCAAGAAGAGGGGTCCTGTCTTTACTGCAGCATTCAGCCCTCTTGTTCAGGTCATGGCAGCCATGATTGATATCCCTGTCTTGCATGAGCAGCTACACCGTGGAAGTGTGATGGGATCAATCTTGGTGATGATCGGATTATACGTTCTTCTATGGGGTAAGAGCAAGGAGATGCAGAATCGTGTTGTGAAGTTAGTCCAAGAAGCTGAAGAAATCAAGGAACAGGAGCCGGAAACACAACAACAAATTGCAGTGTCTTGTGATTCGCGGTGTCAATGA 1107 0.4399 MTTCDEWKPFVVMIAIDFSFAAVNVILKKVLQEGMNHLVFITYRLSIATILLAPVGYFRERNSRPQLTFRVLCYLFVSAIVGASVTQYFFLLGIQYTSATFACAFINIVPATTFIMALPFGIETVNIKSNSGRAKIFGTLVCIGGALLLTLYKGQPLFNYSHYKSLAPVAKNSAVMLSSTRTTRRWTIGVVALILGTLFWSSWFILQSSISKRFPCQYSSTAIMTFFGAIQAAVIGLSTEHNNLSVWVLRGKIELIAVVFSGMIGSGLCFVGMSWCVKKRGPVFTAAFSPLVQVMAAMIDIPVLHEQLHRGSVMGSILVMIGLYVLLWGKSKEMQNRVVKLVQEAEEIKEQEPETQQQIAVSCDSRCQ* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0573 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Dod03g0573 368 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020|GO:0016021
Dod03g0573 368 Pfam EamA-like transporter family 14 150 IPR000620 GO:0016020|GO:0016021
Dod03g0573 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 332 - -
Dod03g0573 368 PANTHER WAT1-RELATED PROTEIN 9 348 - -
Dod03g0573 368 PANTHER WAT1-RELATED PROTEIN 9 348 IPR030184 GO:0016021|GO:0022857
Dod03g0573 368 Coils Coil 331 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0573 Dod-Chr3 6808278 6810746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0573 6 335 Nodulin-like Gene Family AT1G11460 37.160 5.93e-86 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0573 - - gmx:100782136 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2167 04 45293911 45296470 Dod03g0573 03 6808278 6810746 PCT