Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0553 ATGAAGCCCTTTTTCAGATTCTTGCTTCTCCTTGCTCTCTTTGCTCTTGCGGAATCTTCATGCAACAGTACTAGTGGAGACCAGGGCCTGGTTTCTGAGGCCTTCAAATCCGTCTCAGGATTCAACCCTTCACGGTTCTTCCAAACAAGAGATTCTTCCAACTGTTCAGAGGCTGATAATATTAGGAGCATAGTGCTTGTGTCCAAGAACTTGAGTGGAAGTATCTCGTGGGTGCACTTAAAGACCATGACAAAGTTGGAAGTTCTCGATCTATCCGATAATTCCCTGGAAGGCCAGGTACCAAACTGGTTCTGGGCGAGTTCAACCTTATTAAAAGTGAACCTCTCCAAGAACAGGTTCGGAGGGAGAATCAATGCTGCGTCGTCGAAACCCAGTCCCCAAAACGGTTCGTTTTCATCATCACTCCAAGAGCTGAACCTCTCACACAACAGGTTCACCAATCAGGTTCACCTCTCCGGGTTCTCAAACCTGAAAAGCCTCGACCTTTCCCACAACAACCTCGGAACCTTACCTTCGGGGTTCCAAAAGCTCACCAAGCTACAACACCTCGATCTCTCAAGCTGCAACACCAAAGGAACCGTGAAACCCATCTCTTCCCTTCACTCACTGAACTACCTCGACCTCTCAAACAACACATTGAACGGTAGCTTCCCTTCAGATTTCCCTCCCTTAAACAACACCAAATTCCTAAACATCTCAAACAACTTCTTCAAAGCCACAACAACAATAGGCCTAAACGGGTACAAGAAGAAATTCGGGAAATCAGCGTTTATTCACGCGTTCAACAACATTAACAACCTCAACGCATCAAAAAATACTAACAACCTCCATTCAGCGCAACAACCACCCAGTAACAGACCCAGGCACAAGTCGAGGCACAAAAAAAAGGTGACGGTAGTGGCGGTTCCGTGTGCCATTGGGGTTATTGCGCTTGTGGCGTTGTGCGCGTGGGGATGGTGCTGTTACAAGAGGAAAAGGGAAGAGGCCAAGAGGAACAAGTGGGCCATCTCGAAGCCAGTGCCGTTGACGAGCATCAAGATGGAGAGATCAGGGCCGTTCGCATTCGAGACCGAGTCGGGAGCATCGTGGGTTGCTGACCTTAAGGAACCGTCTTCCGCTGCCGTCGTGATGTTCGAGAAGCCGTTGATGAATCTCACCTTCAAGGACCTGATTGCTGCCACGTCACACTTCGGGAAGGACTCTCAGCTAGCCGAAGGGAGGTGTGGGCCCGTTTATCGAGCTGTACTTCCTGGAGACATCCACGTGGCAATCAAGGTTTTGGAAAACGCCAGGGACGTTGATCATGAGGACGCTGTCGCCATCTTCGTTGACCTATCAAGGCTCAAGCACCCTAACCTATTGCCCCTCTCCGGTTATTGCATTGCAGGTAAGGAGAAGCTAGTGTTGTACGAATTCGTGGCAAACGGGGACTTAGGAAGGTGGCTACAAGAGCTACCAACGGGAGAAACCAACGTGGAGGACTGGAGCGGCGACACGTGGGAGATTCAAAACGGCGTCGGATCGCAAACCCCATCCCCAGAAAAGATGGGTTGGCCAACACGACACCGTATCGCCCTAGGGGTGGCGCGTGGCCTCGCATTCCTCCATCACGCGGGGTCGAGGCCCGTCGTACATGGCCACCTCGTCACATCAAACGTTCTACTCTCCGACGACTTCGAGCCCCGAATAGCCGATTTCGGGCTCCGGAAATTCGGGCAGCAGCAACAGAACGCGCCGAATTGCAGCACCGAAACGGACGTGTACTGCTTCGGGGTGGTGCTGATGGAGCTGCTGACGGGGCGGTCCGGTACGGCGGATACGGTGGTTTGGGTTAGGAAGCTGGTGAGGGAGGGCCACGGGGTGCGCGCGTTGGATGAGAGGCTTGGACTCGGCGGTGACGCGGAGGAGGAGATGGTGGAGAGCCTCCGAGTCGCTTACCTTTGCACAGCCGAGTCGCCGGCGAAGAGACCCACCATGCAGCAGGTTTTGGGTCTTCTCAAAGACATTCATCCTAGCCGCGGACTCGACTGA 2052 0.5288 MKPFFRFLLLLALFALAESSCNSTSGDQGLVSEAFKSVSGFNPSRFFQTRDSSNCSEADNIRSIVLVSKNLSGSISWVHLKTMTKLEVLDLSDNSLEGQVPNWFWASSTLLKVNLSKNRFGGRINAASSKPSPQNGSFSSSLQELNLSHNRFTNQVHLSGFSNLKSLDLSHNNLGTLPSGFQKLTKLQHLDLSSCNTKGTVKPISSLHSLNYLDLSNNTLNGSFPSDFPPLNNTKFLNISNNFFKATTTIGLNGYKKKFGKSAFIHAFNNINNLNASKNTNNLHSAQQPPSNRPRHKSRHKKKVTVVAVPCAIGVIALVALCAWGWCCYKRKREEAKRNKWAISKPVPLTSIKMERSGPFAFETESGASWVADLKEPSSAAVVMFEKPLMNLTFKDLIAATSHFGKDSQLAEGRCGPVYRAVLPGDIHVAIKVLENARDVDHEDAVAIFVDLSRLKHPNLLPLSGYCIAGKEKLVLYEFVANGDLGRWLQELPTGETNVEDWSGDTWEIQNGVGSQTPSPEKMGWPTRHRIALGVARGLAFLHHAGSRPVVHGHLVTSNVLLSDDFEPRIADFGLRKFGQQQQNAPNCSTETDVYCFGVVLMELLTGRSGTADTVVWVRKLVREGHGVRALDERLGLGGDAEEEMVESLRVAYLCTAESPAKRPTMQQVLGLLKDIHPSRGLD* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0553 683 Pfam Leucine rich repeat 141 196 IPR001611 GO:0005515
Dod03g0553 683 Gene3D Ribonuclease Inhibitor 28 135 IPR032675 -
Dod03g0553 683 ProSiteProfiles Protein kinase domain profile. 404 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0553 683 Gene3D Ribonuclease Inhibitor 137 258 IPR032675 -
Dod03g0553 683 Gene3D Phosphorylase Kinase; domain 1 364 479 - -
Dod03g0553 683 ProSiteProfiles Leucine-rich repeat profile. 141 162 IPR001611 GO:0005515
Dod03g0553 683 SUPERFAMILY L domain-like 57 282 - -
Dod03g0553 683 Gene3D Transferase(Phosphotransferase) domain 1 514 681 - -
Dod03g0553 683 SMART LRR_typ_2 83 106 IPR003591 -
Dod03g0553 683 SMART LRR_typ_2 207 230 IPR003591 -
Dod03g0553 683 SMART LRR_typ_2 161 183 IPR003591 -
Dod03g0553 683 MobiDBLite consensus disorder prediction 278 300 - -
Dod03g0553 683 PRINTS Leucine-rich repeat signature 164 177 - -
Dod03g0553 683 PRINTS Leucine-rich repeat signature 207 220 - -
Dod03g0553 683 ProSiteProfiles Leucine-rich repeat profile. 163 185 IPR001611 GO:0005515
Dod03g0553 683 PANTHER KINASE, PUTATIVE-RELATED 3 683 - -
Dod03g0553 683 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 3 683 - -
Dod03g0553 683 MobiDBLite consensus disorder prediction 278 292 - -
Dod03g0553 683 SUPERFAMILY Protein kinase-like (PK-like) 383 673 IPR011009 -
Dod03g0553 683 Pfam Leucine Rich Repeat 85 104 IPR001611 GO:0005515
Dod03g0553 683 Pfam Protein tyrosine and serine/threonine kinase 407 670 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0553 Dod-Chr3 6640615 6643898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0553 64 676 Receptor kinase-like Gene Family AT5G07280 30.275 2.75e-71 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Dod03g0553 PK_Tyr_Ser-Thr 5.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0553 - - gmx:100778920 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0553 03 6640615 6643898 Dod03g0553 03 6640615 6643898 ECH
Dod04g2158 04 45195333 45198798 Dod03g0553 03 6640615 6643898 PCT