Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0546 ATGCCAGTAACATTGAAAGGGTGTTACACAGTGAGACCAATGGAGCCAACATGGTGCGGTCGCTTACCATTATCCGAATGGGACCAAATAGGAACCATAACCCACGTACCCACCGTCTACTTTTACACCCCTTCACAAAACTGGCTTTCCCCACACTCCACAATTCCCAACACCTTGAAGGCCTCTTTAAGCCGTGCCCTTGTGCCGTTTTACCCACTGGCTGGTCGTTTAAGCTCGATAGGCAACGGTCGTTTGGAGCTAGACTGCAACTCCATGGGCGCGCGTTTCATCGAAGCTGAATCCACGTTAGCACTAAGCGACCTCGGCGACTACTCGCCTTCCTCGGAGTACCCTCATCTCGTGCCACGTGTGGACTACACGCTCCCGATCCACGAGTTGCCCCTGTTGTACGTGAAGCTCACGCACTTCACGTGCGGCGCAATTAGCCTCGGGATAGCGATTTCCCATGCGGTGGCCGACGGGCAGGGCTTGTTGCACTTCATCAGTGAGTGGTCGAGGCTGGCGCGTGGGGAGCCTCTAAAAACGACTCCGTTTCTGGACAGGACAATGTTACGTCCTGGTGAGCCACCGTCAATGCCGTTGTCAGCATGTCATGCTTACTCACAGTACGAACACCCTCCTCCACTACTGCTTGGCCAAATCAGCAACACCGAACAAGGGAAGAAAAAAACCACCTTGGCAATTCTAAAACTAAGCAAGGACCAAGTTGAGAGATTGAGGAAAAAAGCTAACGAAACCTTGCCTTGTAACGATCGAAGCTATACAAGGTACGAGACTGTGACGGGACACGTGTGGATAAGTGCGTGTAAGGCTAGAGGGCATAAACACGACCAACCAACGGGTTTGGGCATTTCTGTCGACACGAGGTGTCGCATGCAACCACCTTTGCCGAAAGGGTATTTTGGGAATGCGACGTTGGACGTGGTTGCCAAGTGTCTTGCTGGTGATTTGGTTGAGAAGCCGTTAGGGTTTGCTTCGAGGAGGATTAGGGAGGCGATTGAGAAAGTTACTGATGGGTATGTGAGGACAGGGATTGAGTTCTTGAAGAACCAGGAGGATTTGACGAGCTTTCAGGATCTTCGTGCTATGAGGAGTGCTGATGATGAAGGGCCTTTCTATGGAAACCCTAATATGGCTGTGGTGAGTTGGTTGACTTTGCCGATCAATGGGCTTGACTTTGGGTGGGGGAAGGAGGTTCAAATGTATCCTGGGACGTATGAGTTTGATGGGGATTCTTTGCTTCTTCCTGGTCCTGATGGGGATGGGTCTGTGCTCGTTGTCATTTGTTTGCAAGTAGATCATATGGATGCATTTAAGAAGCATTTTTATGATGAAAACATTGTGTAA 1368 0.5044 MPVTLKGCYTVRPMEPTWCGRLPLSEWDQIGTITHVPTVYFYTPSQNWLSPHSTIPNTLKASLSRALVPFYPLAGRLSSIGNGRLELDCNSMGARFIEAESTLALSDLGDYSPSSEYPHLVPRVDYTLPIHELPLLYVKLTHFTCGAISLGIAISHAVADGQGLLHFISEWSRLARGEPLKTTPFLDRTMLRPGEPPSMPLSACHAYSQYEHPPPLLLGQISNTEQGKKKTTLAILKLSKDQVERLRKKANETLPCNDRSYTRYETVTGHVWISACKARGHKHDQPTGLGISVDTRCRMQPPLPKGYFGNATLDVVAKCLAGDLVEKPLGFASRRIREAIEKVTDGYVRTGIEFLKNQEDLTSFQDLRAMRSADDEGPFYGNPNMAVVSWLTLPINGLDFGWGKEVQMYPGTYEFDGDSLLLPGPDGDGSVLVVICLQVDHMDAFKKHFYDENIV* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0546 455 Gene3D - 3 209 IPR023213 -
Dod03g0546 455 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 452 - -
Dod03g0546 455 Coils Coil 233 253 - -
Dod03g0546 455 Pfam Transferase family 1 451 - -
Dod03g0546 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 452 - -
Dod03g0546 455 Gene3D - 220 452 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0546 Dod-Chr3 6550301 6552188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0546 1 451 Monolignol Biosynthesis Gene Families AT5G48930 39.294 8.93e-111 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0546 K13065 - gmx:100777007 647.121