Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0541 ATGCCGAGAACCGTTTTTCCTCACAAATGTCACCCTCTTGCAGCACCAAACTATTTGTCACCCTCTGAAACAAGAAGTTCTGGTCCCGGAGGTTCAAGCTGGGAAAGACTACCCTTCATGCCAATGAAGAGAATTGCTGTGACCTTCTGTCTGTCCAGCAACCTTGCAGCTGTGCCATATAGTGGCAATCCAAATATAGGGATCAGTATTGCCCCAGTCACTCTGAGTAGTGGAGGTTTCCCAGCAGAGCTAGATGCCAAAATGAAACAGAATCAGTCACCTCCACCACATTCTGAGTCTCCACGTGATGCTTTTTCTAATGGAAATCAACCTAGGCTGCAACATTCAGCTAATGGTTCTTCTGGAAATTTGTGGAACAATATCATTAGTCCTAGCTATGATGAGTGCATCATATACAAAGGAACATTATCCAGTGGAGTTGAGATCGCTGTTGTTTCTACTCTGATTACTTCTTCCGAGGATTGGTCAAAGACCATGGAGATAAACTACCGGAGAAAGATTGATTATTTGTCCCGCATAAACCATAAGAACTCTGTCAACCTTATTGGATACTGTGAGGAAGAAGAAACATTCACAAGGATGATGGTGCTTCAGTATGCTCCAAGTGGAAGCCTATCTGAGCATCTACATGTTAAAGAAGTTGAACATCTCGATTGGAGTGAGAGGATGCGGATTATCATGGGCACTGCTTATTGTCTTCAGTACATGCACCATGATTTGAATCCACCAGTAGCTTGTGGCATCCTTAGTTCAACTTTGATCTTATTAACAGATGATTTTGCCGCTAAGATTGCTGAGACCACTTTTAGAAATATTGTATTACAAGCTAAGGCAGCCGAAGAGAGCTCAAAGAAATCTGAGTTGCCACCCAAAGCTGATCCTGAAACCAATGTCTATAACTTCGGGATATTGTTGCTTGAAATCATTTCTGGGAAATTGCCTTACTCTGAAGAACTAGGCCACCTTGTGAACTGGTCTTTTAAAGACAATGAACTTGATGTCATATGTGAGGAGATTCAAGATTGTATCCAACCTGATCCAAGGTCAAGACCAACAATGAGGGACATAACTTCCAAATTGAGGGAAGTGCTTAGCATATCACCTGAGCAAGCGGCCTCAAGCCTGTCTCCACTCTGGTGGGCTGAATTGGAGATCTTATCAGTGGAGGCCACTTAA 1197 0.4302 MPRTVFPHKCHPLAAPNYLSPSETRSSGPGGSSWERLPFMPMKRIAVTFCLSSNLAAVPYSGNPNIGISIAPVTLSSGGFPAELDAKMKQNQSPPPHSESPRDAFSNGNQPRLQHSANGSSGNLWNNIISPSYDECIIYKGTLSSGVEIAVVSTLITSSEDWSKTMEINYRRKIDYLSRINHKNSVNLIGYCEEEETFTRMMVLQYAPSGSLSEHLHVKEVEHLDWSERMRIIMGTAYCLQYMHHDLNPPVACGILSSTLILLTDDFAAKIAETTFRNIVLQAKAAEESSKKSELPPKADPETNVYNFGILLLEIISGKLPYSEELGHLVNWSFKDNELDVICEEIQDCIQPDPRSRPTMRDITSKLREVLSISPEQAASSLSPLWWAELEILSVEAT* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0541 398 MobiDBLite consensus disorder prediction 86 119 - -
Dod03g0541 398 PANTHER LRR RECEPTOR-LIKE KINASE 53 129 - -
Dod03g0541 398 PANTHER LRR RECEPTOR-LIKE KINASE 127 398 - -
Dod03g0541 398 SUPERFAMILY Protein kinase-like (PK-like) 137 367 IPR011009 -
Dod03g0541 398 Gene3D Transferase(Phosphotransferase) domain 1 135 374 - -
Dod03g0541 398 MobiDBLite consensus disorder prediction 91 119 - -
Dod03g0541 398 Pfam Protein tyrosine and serine/threonine kinase 159 367 IPR001245 GO:0004672|GO:0006468
Dod03g0541 398 PANTHER PROTEIN MALE DISCOVERER 2 53 129 - -
Dod03g0541 398 PANTHER PROTEIN MALE DISCOVERER 2 127 398 - -
Dod03g0541 398 ProSiteProfiles Protein kinase domain profile. 110 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0541 Dod-Chr3 6499684 6502313 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0541 126 377 Receptor kinase-like Gene Family AT5G65700 29.123 2.32e-28 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Dod03g0541 PK_Tyr_Ser-Thr 7.8e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0541 - - adu:107468254 408.683