Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0540 ATGAAGAACCCCGTGGTGGAGAGGTTCTCCGAGTTCTACGAGAACTGGGTTTGGAAGCTCGAGCAGATCCTGCACCATCTTCTCGAGGTGTCCAAGAAGAGAACCGAGGCGGTGGCGGCCATGACAGAACAAGAGCTGCAAGCCCTAGTGTCGAAAGTCACGACCCATTTGAAGGAATACTACACCGTGAAATGGGTTGCGGCGCGTGAGGACGTTCTGGTGTTCTTCTCACCTGTTTGGCTTACCCCTCTAGAGAACGCTTACCTTTGGGTCACTGGCTGGAAGCCCTCCACAGCGTTCAAGCTGTTGGAATCCCTCAAGAAGAAGAAGGTTCTCGAGATGACGGGGGAGCAAGAGAGGAAAATAGAGGAGCTTAGGGTGAGTATGAGGATGGAGGAGGAGAAGGTGGAGAGGGAGATGGAGAGGCAGCAGGTTGCCATGGCTGACAGAAAAATTGTGGAGCTGGTGAAGCTTTCGAGCAGGGGTATAAGGGTCAATAACAATGGGCTTGATCAGGTTGTTGGTGGTGTTATTGATGGGGTGATGGAGGTGGCCTTGAAGGGTGTGTTTGCTGGCTTGGAGAGGGTCATGAAGGCTTCTGATTGTGTTAGGCTCAAGACTCTCAAAGGGGTGCTGGATGTGCTTGGTCCAATGCAGTGTGTGCACTTCTTGGCTGCTAATATTGCTATGCAGCTTCGGCTTCGGCAGTGGGGGAAGAAGATGGACCTGCTTGATCCCTACTAA 744 0.5242 MKNPVVERFSEFYENWVWKLEQILHHLLEVSKKRTEAVAAMTEQELQALVSKVTTHLKEYYTVKWVAAREDVLVFFSPVWLTPLENAYLWVTGWKPSTAFKLLESLKKKKVLEMTGEQERKIEELRVSMRMEEEKVEREMERQQVAMADRKIVELVKLSSRGIRVNNNGLDQVVGGVIDGVMEVALKGVFAGLERVMKASDCVRLKTLKGVLDVLGPMQCVHFLAANIAMQLRLRQWGKKMDLLDPY* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0540 247 Coils Coil 122 151 - -
Dod03g0540 247 PANTHER - 1 242 - -
Dod03g0540 247 Pfam Seed dormancy control 38 104 IPR025422 GO:0006351|GO:0043565
Dod03g0540 247 ProSiteProfiles DOG1 domain profile. 6 244 IPR025422 GO:0006351|GO:0043565
Dod03g0540 247 PANTHER PROTEIN DOG1-LIKE 4 1 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0540 Dod-Chr3 6496593 6497336 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0540 42 235 bZIP Transcription Factor Family AT5G06960 28.866 4.21e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0540 - - gmx:100808459 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0540 03 6496593 6497336 Dod03g0540 03 6496593 6497336 ECH