Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0539 ATGGGAATGAGATGGCGCACATTTGGATTTTGGCTTAGAATTTATATTTGCTTGATTTCTGTGTGGGGAGTCCAAGAGTGTTGGTCCCTTAATGATGAAGGAATAGCTTTGTTGGAGTTCCGGGCAAGAATAACTTCTGATCCTTATTTTGCATTGGCAAATTGGAATCCGAATGACTGTGACCCTTGCAAGTGGTCGGGCGTTCATTGTGTCGATGGTAAAGTGCAAATGCTGGAACTGAAAGGGCTATCTTTGGAAGGGACATTGGCTCCTGAGCTTGGAAAACTTAGTCACTTAAAATCCCTTGTGTTATGCAAGAATAACTTTTCTGGAACCATTCCTGAAGAACTTGGAGACCTAGCAGAGCTGGAGCTATTGGATTTGAGGGAAAATAACTTGAGTGGAAGTATCCCGGAAGAAATTGTCAGGTTGTTATTGCTAAAACACTTGTTGCTTTGTGACAATACAATCAAAGGCAGTGATTCTCAGTATCATGGAAAGCTTAGATTTCCATCTAAATCGCTACTTGTTGGCAATTGTTCGTCACCTCTAACAACTTTAATTTCCTGCATCAATAGAAAGTTTGGACACTGTGTGTGGAAGACCAAATTGAAGCAATGGAACAAACCAGAGTCATTGGTTATTCCAATGAAAGTTGCGGTAGCAAAATACCTCGGTGCCCTTGTGCTGCCACTGTTCAAGCTGGGAAAGACTACCCTTCAAGCCAATGAAGAGAATTGCTGTGACCTTCTGTCTGGTTCTAATGAGCCAGAGACCGCCCAGAATGTACCAAATCTAGTCAGTTCTGCACGTCGAAAGTTACTTGATCAGTCCAGTAACCTCGCAGCTGTGCCATACAGTGGCAATCCAAATATAGGTATCAGTACTGCACCAGTCACTCTGAGTAGTGGAGGGTTCCCAGCAGTGCCAGATGCCACAAAGAAACAGAATCAGTCACCTCCACCACAGCAGGCACCTTCTGAGTCGCCACGTGATGCGTCTTCTAATGGAAATCAACCTAGGCCGCAACATTCAGCTAATGGTTCTGCTGGAAAGTTGTGGAAGTATATTATTTTCATTGCATTTGTGGTTGTGTTGGTCATTGTTATCATAGTCATTCTTTGCATTTGGCGAAAGCGAGCAGAAAAAGTAATAAAACCATGGAGGACAGGAATAAGTGGACAGTTGCAGAAAGCATTTATAACAGGGGTCCCCAAGTTGGATCGAGGAGAATTAGAGACAGCTTGTGAGGATTTCAGCAATATCATTAGTACTAGCTATGATGAGTGCATCATATACAAAGGAACACTGTCCAGTGGAGTTGAGATCTCTGTTGTTTCTACTCTGATTACTTCTTCCGAAGATTGGTCAAAAAGCATGGAGATAAACTACCGGAGAAAGATTGATTATTTGTCCCGCATAAACCATAAGAACTTTGTTAACCTTGTTGGATACTGTGAAGAAGAAGAACCATTCACAAGGATGATGGTGTTTGAGTATCCTCCAAGTGGAAGCCTGTTTGAGCATCTACATGTCAAGGAAGTTGAACATCTCGATTGGAGTGAAAGGATGCGGATTATCATGGGCACTGGTTATTGTCTTCAGTACATGCACCATGATTTGAATCCACCAGTAGCTTGTGGCATCCTTAGTTCAACTTTGATCTTATTATCAGATGATTTTGCTGCTAAGATTGCTGAGACCACTTTTAGAGATATTGTTGTACAAGCTAAGGCAGCCGAAGAGAGCTCAAAGAAATCTGAGTTGCCACCCAAAGCTGATCCTGAAACCAATGTCTATAACTTCGGGATATTGTTGCTTGAAATCATTTCTGGGAAAGTGCCTTACACTGAAGAACAAGGCCACCTTGTGAACTGGGCTGCTGAGTACTTGAATGACAAGAGAAGCATCAGTTACATGATCGACCCAAGTCTGCAGTCTTTTAAAGACAATGAACTTGATGTCATATGTGAGGTGATCCAAGATTGTATCCAACCTGATCCAAGGTCAAGACCAACAATGAGGGACATAACTTCCAAATTGAGGGAAGTGCTTAGCATATCACCTGAGCAAGCGGCCCCAAGACTCTCTCCACTCTGGTGGGCTGAATTGGAGATCTTATCAGTGGAGGCCACTTAA 2139 0.4278 MGMRWRTFGFWLRIYICLISVWGVQECWSLNDEGIALLEFRARITSDPYFALANWNPNDCDPCKWSGVHCVDGKVQMLELKGLSLEGTLAPELGKLSHLKSLVLCKNNFSGTIPEELGDLAELELLDLRENNLSGSIPEEIVRLLLLKHLLLCDNTIKGSDSQYHGKLRFPSKSLLVGNCSSPLTTLISCINRKFGHCVWKTKLKQWNKPESLVIPMKVAVAKYLGALVLPLFKLGKTTLQANEENCCDLLSGSNEPETAQNVPNLVSSARRKLLDQSSNLAAVPYSGNPNIGISTAPVTLSSGGFPAVPDATKKQNQSPPPQQAPSESPRDASSNGNQPRPQHSANGSAGKLWKYIIFIAFVVVLVIVIIVILCIWRKRAEKVIKPWRTGISGQLQKAFITGVPKLDRGELETACEDFSNIISTSYDECIIYKGTLSSGVEISVVSTLITSSEDWSKSMEINYRRKIDYLSRINHKNFVNLVGYCEEEEPFTRMMVFEYPPSGSLFEHLHVKEVEHLDWSERMRIIMGTGYCLQYMHHDLNPPVACGILSSTLILLSDDFAAKIAETTFRDIVVQAKAAEESSKKSELPPKADPETNVYNFGILLLEIISGKVPYTEEQGHLVNWAAEYLNDKRSISYMIDPSLQSFKDNELDVICEVIQDCIQPDPRSRPTMRDITSKLREVLSISPEQAAPRLSPLWWAELEILSVEAT* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0539 712 Pfam Protein tyrosine and serine/threonine kinase 453 681 IPR001245 GO:0004672|GO:0006468
Dod03g0539 712 PANTHER PROTEIN MALE DISCOVERER 2 1 712 - -
Dod03g0539 712 Gene3D Ribonuclease Inhibitor 32 188 IPR032675 -
Dod03g0539 712 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Dod03g0539 712 PANTHER LRR RECEPTOR-LIKE KINASE 1 712 - -
Dod03g0539 712 SUPERFAMILY Protein kinase-like (PK-like) 457 681 IPR011009 -
Dod03g0539 712 ProSiteProfiles Protein kinase domain profile. 401 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0539 712 Gene3D Phosphorylase Kinase; domain 1 389 500 - -
Dod03g0539 712 MobiDBLite consensus disorder prediction 312 346 - -
Dod03g0539 712 SUPERFAMILY L domain-like 28 168 - -
Dod03g0539 712 MobiDBLite consensus disorder prediction 306 346 - -
Dod03g0539 712 Gene3D Transferase(Phosphotransferase) domain 1 502 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0539 Dod-Chr3 6489318 6494503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0539 85 684 Receptor kinase-like Gene Family AT5G56040 25.613 9.86e-39 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Dod03g0539 PK_Tyr_Ser-Thr 1.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0539 - - adu:107468254 1033.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0539 03 6489318 6494503 Dod03g0539 03 6489318 6494503 ECH