Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0537 ATGTCACACTCACAAGGATATGAGATTAACGATGACAATGAGAGGAGTGGCAAGAATGATGATGAGGAGCAGGATGAGGAGACTTCATTAGGATCATCTCAGAAATGCTCTTCCTTTGATTTGAATGAAGAGGCAAGCAGTGAAGAGAACAATGACGACACAGATGAGGCCTGTGAAATGGCAACTGAGGGGAAACAGAAAGCAATTAGGGATGATGAGGGAACTTCTTCAGGAAATAGAAGTAGTAATAGTCCATCAACAGAAGGAAAGGAGAGAAGAGGTGCAGTTAGACAATATGTCAGATCCAAGATGCCTCGGCTTCGGTGGACTCCTGATCTTCATCTCTCCTTTGTGCATGCTGTTGAAAGACTTGGCGGTCAAGAGAGAGCAACACCCAAGTTGGTGCTTCAGCTAATGAATGTGAGAGGACTCAGCATTGCTCATGTCAAGAGTCACCTGCAGATGTACCGTAGCAAGAAACTTGACGTAGCCGGGCAAGTACTAAGCCCAACATACAGATCGACACCAGGAGTAGTAGGTCGTAGAACTCATATACTCCAACAGTCCACGAGTCTTCATCAACATTTCAAGATGGGAAATGGTGGAATCATCCTAGCAAGTAATTTCAATGAGCATAGTCATTTCCAAGGTCTGATGCAGCCCCCCTTCTCCCTATCACGTTCACATGCAAACGCCACCGACTCAAGACAACATCAATTGTACTTCAATCATCAACATTTCAGAATACCAACTTATGTAACAAGCAACGAAGTTGTCTCTCCAACTCAAGGAAGATCAATAGCTTCAAACCAAATTCAACTCGTCGATAAATCCTGCAGAATTGCACCTATCAGACCAAGCCAATTCCACGAAGAGAAAAAGTGGCCTCCATTAGAAATTGTGAACAATAATCAATGGAAGTTCAATAATTTACCTTCCAATAATATTACTGCTAATGCAGAGTCATCAAAATCTGTTGTACATCAATTTGGCACCATGCCTGAATCTGTTCGGCCATCTACCAGAGAATATCTATCGATCTCCAATAGTTTGAAGCAAGAATTTGACCCTCCATTTCGGATAAAGTTAAATCAAGAAAGTATGCAGAAAAATGAGCAATGGTTGCCTGATTTGCAACTGGGTTTGAGTCACGGAGATGGAACTGACGATGGCAACAAGATTGATCAATGCAGAGAAGCCCAAGAAATCAGCACTAAGCTTTCACTTTCTTAG 1233 0.4242 MSHSQGYEINDDNERSGKNDDEEQDEETSLGSSQKCSSFDLNEEASSEENNDDTDEACEMATEGKQKAIRDDEGTSSGNRSSNSPSTEGKERRGAVRQYVRSKMPRLRWTPDLHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDVAGQVLSPTYRSTPGVVGRRTHILQQSTSLHQHFKMGNGGIILASNFNEHSHFQGLMQPPFSLSRSHANATDSRQHQLYFNHQHFRIPTYVTSNEVVSPTQGRSIASNQIQLVDKSCRIAPIRPSQFHEEKKWPPLEIVNNNQWKFNNLPSNNITANAESSKSVVHQFGTMPESVRPSTREYLSISNSLKQEFDPPFRIKLNQESMQKNEQWLPDLQLGLSHGDGTDDGNKIDQCREAQEISTKLSLS* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0537 410 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 11 410 - -
Dod03g0537 410 MobiDBLite consensus disorder prediction 58 74 - -
Dod03g0537 410 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 161 IPR017930 -
Dod03g0537 410 Gene3D - 104 161 - -
Dod03g0537 410 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 105 160 IPR006447 GO:0003677
Dod03g0537 410 MobiDBLite consensus disorder prediction 1 96 - -
Dod03g0537 410 Pfam Myb-like DNA-binding domain 107 157 IPR001005 -
Dod03g0537 410 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 11 410 IPR044848 GO:0003700
Dod03g0537 410 SUPERFAMILY Homeodomain-like 103 159 IPR009057 -
Dod03g0537 410 MobiDBLite consensus disorder prediction 30 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0537 Dod-Chr3 6466847 6472435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0537 96 162 G2-like Transcription Factor Family AT2G42660 83.582 3.05e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod03g0537 Myb_DNA-binding 1.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0537 - - gmx:100808625 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0537 03 6466847 6472435 Dod03g0537 03 6466847 6472435 ECH
Dod04g2156 04 45157699 45163691 Dod03g0537 03 6466847 6472435 PCT