Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0531 ATGCCGGATTTCAACGATTCCGCTGCTCCGACGGCCGCCACCACCACCAATACCACCGCAGCCGCTCCCCGCCCCGTCCCCGTACGCGAGGACTGCTGGACGGAGGAGGCCTCCGCCACTCTCGTCGACGCGTGGGGCCGCCGCTACCTCGAGCTCAACCGCGGCAACCTCCGCCAGAAGGACTGGCAGGACGTCGCCGACACCGTCAACGCCCTTCACGGCCTCACGAAGAAGACGCACCGCACCGACGTCCAGTGTAAGAATCGCATCGACACCATCAAGAAGAAGTACAAGGTCGAGAAGGCTAGGGTTGCGGCCTCCAACGGCGCCGTTTCGTCCACGTGGCCTTTCTTCGAGCGATTGGACGCTCTGATTGGCCCTAATTTTAACTCCAAGAAGAATCCCTCTTCCCCCTCCCCGTCTCCTCCGGTCGCTCTGCCTTTGCTGCCGTATCGGAAGGCCACGACGCCTTCTCCTTTGACAGTGGTGCCGCCAACCGCCGTGGCGCTGCCGCAGAAGCGGTCGGCGTCGGCGGCTGCGGCGATGGACGATGGTTACTTCAGGAGGAATTATTCGGCGATGGCGGCTGCGGCTGCTGCCGCGGAGGCCGATGAGGAGGATGAGGAAGAGGAAGAGGATGAGGAGGAGGAAGAGGAGGAGGATGAAGATGAGGGAGGGAGGGGAAGCGAGGTGGAGGAAGGGGAGAGGGATAGGGAAGGGATGAGGAGGTTGGCGAAGGCGATAGAGAGGTTTGGGGAAGTGTATGAGAGAGTGGAGGGGCAAAAGCTGAGGCAAATGGTGGATTTGGAGAAGCAGAGGATGCAGTTCGCTAAGGATCTTGAGGTGCAGAGGATGCAGATGTTTATGGACACGCAGGTTCAGTTGGAGAGGATTAAGCGCGGGAAGAGATCTGGGTCTAACGGTGTTATTGATTTTATAATAAGTTGTCAAACAACTTGGGAAGATGGATTTGGAGAAGTATTTGGTAGGGACTAG 996 0.5884 MPDFNDSAAPTAATTTNTTAAAPRPVPVREDCWTEEASATLVDAWGRRYLELNRGNLRQKDWQDVADTVNALHGLTKKTHRTDVQCKNRIDTIKKKYKVEKARVAASNGAVSSTWPFFERLDALIGPNFNSKKNPSSPSPSPPVALPLLPYRKATTPSPLTVVPPTAVALPQKRSASAAAAMDDGYFRRNYSAMAAAAAAAEADEEDEEEEEDEEEEEEEDEDEGGRGSEVEEGERDREGMRRLAKAIERFGEVYERVEGQKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKRSGSNGVIDFIISCQTTWEDGFGEVFGRD* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0531 331 Coils Coil 194 224 - -
Dod03g0531 331 Pfam Myb/SANT-like DNA-binding domain 30 124 IPR044822 -
Dod03g0531 331 MobiDBLite consensus disorder prediction 197 240 - -
Dod03g0531 331 MobiDBLite consensus disorder prediction 201 228 - -
Dod03g0531 331 PANTHER OS05G0560600 PROTEIN 14 307 - -
Dod03g0531 331 Gene3D - 33 99 - -
Dod03g0531 331 MobiDBLite consensus disorder prediction 1 23 - -
Dod03g0531 331 MobiDBLite consensus disorder prediction 8 22 - -
Dod03g0531 331 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 14 307 IPR044823 -
Dod03g0531 331 MobiDBLite consensus disorder prediction 129 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0531 Dod-Chr3 6407664 6410242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0531 200 306 Trihelix Transcription Factor Family AT3G14180 38.053 1.86e-15 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod03g0531 Myb_DNA-bind_4 3.1e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0531 - - gmx:100785349 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0531 03 6407664 6410242 Dod03g0531 03 6407664 6410242 ECH