Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0498 ATGGATTCTTTCAATGCCAATGGAGGATCATCAGAGAGGCTCAAGGCCTTGGCACAACAACTCAGCCTTTACAAGCCCCCACCAACAGCATTCTCGGAAGACATATTGGAGCAGTTCAAGGAAGAAAGTGTTGTTTCTTCGCATGCTCCTAACAATGAAAAAATCAGACTCAAGAGAGCTGCTGTTTTGATCTGCATCTTTGAAGGGGATGCTGGGGATCTTCGTGTGATACTCACTAAGCGATCTTCCAAGCTCTCTACTTACTCGGGTGAAGTGGCCTTGCCTGGTGGGAAAGCAGAAGAAGAGGATAAGGATGATGGAGACACCGCAAAAAGAGAGGCAATGGAAGAAGTTGGGTTGGACCCAAAGCTTGTTAATGTTGTTACTTTTCTTGAACCATTCTTCTCTAAGTACCTTATAATAGTGGTTCCTGTGGTTGGTATACTGCATGACAAAAAAGCATTCAAGCCTGTTCTGAATCCTGCTGAAGTGGAAGCTGTATTTGATGCACCTTTAGAAATGTTTCTCAAGGATGAAAATAGGAGTCAGGAGGAGAGACAGGTGATGGGAAAGAAGTATCTCATACATTTATTTGACTATGAAGTCGAGCATAAGAAATACCTCATATGGGGTCTAACAGCTGGCATCTTGATAAGGGCTGCATCAGTTGTGTATCAACGGCCTCCAGCTTTTAAGGAGCAGAATGCTACTATACAAAATTCCTGA 726 0.4339 MDSFNANGGSSERLKALAQQLSLYKPPPTAFSEDILEQFKEESVVSSHAPNNEKIRLKRAAVLICIFEGDAGDLRVILTKRSSKLSTYSGEVALPGGKAEEEDKDDGDTAKREAMEEVGLDPKLVNVVTFLEPFFSKYLIIVVPVVGILHDKKAFKPVLNPAEVEAVFDAPLEMFLKDENRSQEERQVMGKKYLIHLFDYEVEHKKYLIWGLTAGILIRAASVVYQRPPAFKEQNATIQNS* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0498 241 ProSiteProfiles Nudix hydrolase domain profile. 57 193 IPR000086 -
Dod03g0498 241 MobiDBLite consensus disorder prediction 96 113 - -
Dod03g0498 241 PANTHER NUDIX HYDROLASE 1 43 IPR045121 GO:0010945
Dod03g0498 241 PANTHER NUDIX HYDROLASE 52 236 IPR045121 GO:0010945
Dod03g0498 241 Pfam NUDIX domain 58 175 IPR000086 -
Dod03g0498 241 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 28 222 - -
Dod03g0498 241 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 1 43 - -
Dod03g0498 241 CDD CoAse 58 218 IPR045121 GO:0010945
Dod03g0498 241 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 52 236 - -
Dod03g0498 241 MobiDBLite consensus disorder prediction 91 113 - -
Dod03g0498 241 SUPERFAMILY Nudix 47 217 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0498 Dod-Chr3 5966928 5968488 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0498 - K17879 gmx:100814748 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0498 03 5966928 5968488 Dod03g0498 03 5966928 5968488 ECH
Dod03g0498 03 5966928 5968488 Dod04g1383 04 35224755 35226104 ECH