Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0485 ATGGCTTCTTCTAACAGACACTGGCCAAGCATGTTTAAGTCCAAGCCCTGCAACCCTCACCATCAATGGCAGCATGACATCAACTCCTCTCTCATCTCTACTGGTTGCCACAGATCAGGCCCTTACTCTTCAGCTGCTGGTTGTGAAGAGAGAAGTCCAGAGCCAAAGCCAAGGTGGAACCCAAAACCAGAGCAAATTCGGATTCTGGAAGCGATATTCAACTCTGGGATGGTGAATCCTCCAAGAGACGAGATAAGGAAGATAAGGGCACAGTTGCAGGAGTATGGCCAAGTTGGTGATGCCAATGTCTTCTATTGGTTCCAGAACCGCAAATCCAGGAGCAAGCACAAGCTTCGCCACCTTCAGAACTCAAAGAACCACAACAGCAACCCAGAAACCCCTCAACAAAACACTAATGCTACACACCCTCACCCTCAAATCACTGCACCTTCATCCTCATCTTCTTCCTCTGAGAAATCTTCCCCAAAGGAAATAATACCCACTAAGGTATTCTCCATTGGCTTCTCTAATGTCACCGATGTGGTGCCCAATTCTCCCACAACCTCTGTGAACCAGACCTATTTTCACACTCATCACAGTGAGGCCAATCTTGCACCACCATCACCACCGCTGCCGGTGGTTGCAACTGCTCCGGCTGAGGCCTTCTTCTTTCCAGTGCAACATCATCATGGTCAAGGAATAGTAGTTCCTAATAGTACCATAACATCACAAGGGTTTTGCTTCTCTGAGCTCTCCAATGTGGTTCAAGCACAACCACATGGCCAACATCACGTTGGTCCTTGCACTAGTCTCTTGCTTAGTGAGATCATGAGCCATGGATCATGCGCTTCAAAGAAAGACCAAGAACATGAGAAGTCCGTGAAAATAATGCAACACCCACCACAGCTTGGTTCCTGTGTTACTCCACCTACAACTGCTCACAGTACTGCTATTGTCCCTCCTATCACTACCACCGCCGTTACTGTTCCATCACCCCTCATCACTCAAGTTCAAGGCATCGGAGATCCAGCTGTGACTGCAAAATCAACTGTGTTCATAAATGATGTGGCGTTTGAGGTGGCGGTGGGACCTTTCAATGTGCGTGAGGCCTTTGGGGATGATGCAGTGCTCATCCACGCCACTGGTCATCCTGTTCTCACAAACCAGTGGGGTGTCACCCTCCACTCACTCCAGCATGGCGCTTCTTACTATCTGATTTAG 1221 0.4873 MASSNRHWPSMFKSKPCNPHHQWQHDINSSLISTGCHRSGPYSSAAGCEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRHLQNSKNHNSNPETPQQNTNATHPHPQITAPSSSSSSSEKSSPKEIIPTKVFSIGFSNVTDVVPNSPTTSVNQTYFHTHHSEANLAPPSPPLPVVATAPAEAFFFPVQHHHGQGIVVPNSTITSQGFCFSELSNVVQAQPHGQHHVGPCTSLLLSEIMSHGSCASKKDQEHEKSVKIMQHPPQLGSCVTPPTTAHSTAIVPPITTTAVTVPSPLITQVQGIGDPAVTAKSTVFINDVAFEVAVGPFNVREAFGDDAVLIHATGHPVLTNQWGVTLHSLQHGASYYLI* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0485 406 SMART HOX_1 54 121 IPR001356 GO:0003677
Dod03g0485 406 MobiDBLite consensus disorder prediction 42 63 - -
Dod03g0485 406 CDD homeodomain 55 117 IPR001356 GO:0003677
Dod03g0485 406 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 406 - -
Dod03g0485 406 Gene3D - 56 122 - -
Dod03g0485 406 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 406 IPR044557 GO:0003700|GO:0050793
Dod03g0485 406 MobiDBLite consensus disorder prediction 124 163 - -
Dod03g0485 406 Pfam Homeodomain 56 116 IPR001356 GO:0003677
Dod03g0485 406 MobiDBLite consensus disorder prediction 115 163 - -
Dod03g0485 406 ProSiteProfiles 'Homeobox' domain profile. 52 117 IPR001356 GO:0003677
Dod03g0485 406 SUPERFAMILY Homeodomain-like 52 120 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0485 Dod-Chr3 5829087 5832689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0485 1 406 Wox Gene Family AT5G45980 38.221 7.97e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dod03g0485 Homeodomain 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0485 - - cam:101490093 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0485 03 5829087 5832689 Dod03g0485 03 5829087 5832689 ECH