Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0482 ATGGACCAACAACATAAACTGTTTCCTCTACTGATGCTTCTTGTCCAAGTTCTGCTTGTAACAGCACAGACTTCCAGTCAAGACTATAATGGCCTAGCAGCTTTAACAGGATTCTGGAGAAACAAACCACCAAGTTGGGAGGGACCAGATCCTTGCGGTAATGGTTGGGAAGGAATTCGTTGCACCCGTTCAAGAATCACCCAATTGAAACTATTAGGCATGAATTTGGTGGGTCAGCTGTCTTCAGCAATCCAGTCATTATCTGAATTAGAAATCTTGGATCTTTCTTACAACACGGGTTTGACAGGAACAATTCCACAGGAAATTGGGAGTTTGACAAAGCTAAAATCCCTGGCACTGGTTGGTTGTGGTTTCTCTGGTCCCATTCCAGATTCAATAGGAGCTTTACAGCAGCTCACCTTTCTAGCACTGAACTCTAATAATTTCAATGGAACTATTCCACACTCCATTGGCAATCTGTCCAATATTAATTGGCTAGATATTGCTGATAATCAGCTTGAAGGACCTATTCCTGTCTCTGATAACCAAGGACGACAAGGTCTTGACCTGCTCCTTCAGGCCCAACACTTTCATATGGGGAACAACAAGCTCTCTGGTTCAATACCAGCAAAACTATTCAACTCCAATATGAAACTAATACACGTGCTTTTGGACAGCAATCAACTAGAGGGTAGTATCCCTAGCACCCTTGGAAATGTGGACACATTGCAGGTGGTGCGCTTGGATAGGAATGGATTAATCGAGGGAGTGCCTTCAGAGTTCAAAAGCCTCGGAAACCTTAGTGAACTGTATTTATCCCAAAACAAGCTGAATGGCTCTCTGCCGGACCTTAGTGGAATGGAGAATCTCTTCTATGTGGATATGAGCAAGAATTCTTTCAGTTCTTCTGACGTTCCTCCGTGGGTTTCAAGTTTGCCGTCTCTGACAACAGTGCTACTTGGGGACAACCAGCTGAGTGGCACATTCAATCTTAGCAGTGGCTTTAGCAGCAGTCTGCAAATCATTGATTTGCGGGATAATGAAATAACCAACTACGTGCAGCCAAAACAAAATATAAATTTTCAAGTGGTGCTGGCTGGTAATAAAGTTTGTCTTGAAACTGGTGTTTCACAACAGAGTTACTGCCAACTTCCCCTAAACATTCAGCCATATTCAACACCAGCAAATAATTGTACTCCTCAATCTTGCAACTCCGATCAGGTTTCAAGTCCAAATTGTAAATGTGCATATCCCTATACTGGAACACTGTTCTCCAGAGCTCTTAGTCTGTCAGTCCTTAATGATACTAACTACAAGGATCTTGAGCAATCTCTGTTCGATAGTTTTCAGTCCGAAAAGCTTCCTGTGGATTCAGTTTCTCTGAGTAACCCCTTGAAGAACACATCGAGTGATTATTTTCAATTGACTCTGAGTATCTTCCCATCTCAAACCGATCGTTTCAATAGAACTGGACTTTCGAGTGTTGCTTTCGTGCTTAGCAACCAAATCTTCAAGCCCCCAGAATTTTTCTCCCCTTACTTCTTCAACGGTCTCAACTACGCATACTATGGAGGTGAGCCTGAGGGATCGAAGTCATCACATACTGGTGTTATAATAGGTGCAGTGGTTGCTGTTTTGGTGTTTGTTGTGCTAGCATTCTTTGCAGGGATATATGCCCTCCGCCAAAAGAGAAGAGCATCAAGATCTGAACAGATCAACAACCCTTTTGCGAATTGGGAACTGAACACGAATAGTGGCACTGCTCCTCAGTTGAAAGGAGCAAGATGGTTTTCTTTTGAAGATCTGAAGAAATACACCAACAGCTTCTCAGAAACCAATACTATTGGATCTGGGGGCTATGGAAAGGTTTACCAAGGTGTTCTTCCTGCCGGGGAAATTGTTGCCATCAAACGTGCTGCACAAGAATCTATGCAGGGTGCTCTTGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCACCATAAGAATCTAGTTAGTCTTGTGGGTTTCTGTTTTGAGAAGGGTGAACAAATGCTGGTATATGAGTACATTCCAAATGGCACTATAATGGATAGCCTTACAGGAAAGTCTGGGATCTGGATGGATTGGATAAGAAGGCTGAAAGTAGCACTGGGTGCAGCCCGGGGGTACTTGGATCCTGAGTATTACATGACCCAGCAGTTGACTGAAAAGAGCGATGTATACAGCTTTGGAGTGGTAATGCTTGAACTAGTAACAGCAAGAAGGCCAATAGAGCAAGGAAAGTATATAGTAAGAGAGGTAATGAGGGTAATGGATACATCAAAAGATTTATACAACCTTCATTCCATATTGGATCCAACCATACTCAAAGCGACAAGCCCAAAAGGTTTAGAAAAGTTTGTCGAGCTTGCAATGAGGTGTGTCAAAGAATATGCAGCTCAGAGGCCTACAATGGCTGAGGTTGTAAAAGGGATTGAGAACATAATTGAGCTTGCTGGTGTGAATCCCAATGCTGAATCAGCTTCTACGACAGAAAGTTATGACGTACCACGAGATGGGGATGCCAAACATCCTTACAGCAATGAAGATTTTAGCTACAGTGGAATGTTTCCAACAGCGAAGGTAGAACCTCAATGA 2622 0.4287 MDQQHKLFPLLMLLVQVLLVTAQTSSQDYNGLAALTGFWRNKPPSWEGPDPCGNGWEGIRCTRSRITQLKLLGMNLVGQLSSAIQSLSELEILDLSYNTGLTGTIPQEIGSLTKLKSLALVGCGFSGPIPDSIGALQQLTFLALNSNNFNGTIPHSIGNLSNINWLDIADNQLEGPIPVSDNQGRQGLDLLLQAQHFHMGNNKLSGSIPAKLFNSNMKLIHVLLDSNQLEGSIPSTLGNVDTLQVVRLDRNGLIEGVPSEFKSLGNLSELYLSQNKLNGSLPDLSGMENLFYVDMSKNSFSSSDVPPWVSSLPSLTTVLLGDNQLSGTFNLSSGFSSSLQIIDLRDNEITNYVQPKQNINFQVVLAGNKVCLETGVSQQSYCQLPLNIQPYSTPANNCTPQSCNSDQVSSPNCKCAYPYTGTLFSRALSLSVLNDTNYKDLEQSLFDSFQSEKLPVDSVSLSNPLKNTSSDYFQLTLSIFPSQTDRFNRTGLSSVAFVLSNQIFKPPEFFSPYFFNGLNYAYYGGEPEGSKSSHTGVIIGAVVAVLVFVVLAFFAGIYALRQKRRASRSEQINNPFANWELNTNSGTAPQLKGARWFSFEDLKKYTNSFSETNTIGSGGYGKVYQGVLPAGEIVAIKRAAQESMQGALEFKTEIELLSRVHHKNLVSLVGFCFEKGEQMLVYEYIPNGTIMDSLTGKSGIWMDWIRRLKVALGAARGYLDPEYYMTQQLTEKSDVYSFGVVMLELVTARRPIEQGKYIVREVMRVMDTSKDLYNLHSILDPTILKATSPKGLEKFVELAMRCVKEYAAQRPTMAEVVKGIENIIELAGVNPNAESASTTESYDVPRDGDAKHPYSNEDFSYSGMFPTAKVEPQ* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0482 873 Gene3D Phosphorylase Kinase; domain 1 580 684 - -
Dod03g0482 873 Pfam Protein tyrosine and serine/threonine kinase 718 818 IPR001245 GO:0004672|GO:0006468
Dod03g0482 873 Pfam Protein tyrosine and serine/threonine kinase 612 717 IPR001245 GO:0004672|GO:0006468
Dod03g0482 873 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 2 717 - -
Dod03g0482 873 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 717 843 - -
Dod03g0482 873 Gene3D Ribonuclease Inhibitor 19 182 IPR032675 -
Dod03g0482 873 PANTHER RECEPTOR-LIKE PROTEIN 55 2 717 - -
Dod03g0482 873 PANTHER RECEPTOR-LIKE PROTEIN 55 717 843 - -
Dod03g0482 873 Gene3D Transferase(Phosphotransferase) domain 1 687 842 - -
Dod03g0482 873 SUPERFAMILY L domain-like 32 282 - -
Dod03g0482 873 ProSiteProfiles Protein kinase domain profile. 609 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0482 873 SUPERFAMILY Protein kinase-like (PK-like) 599 824 IPR011009 -
Dod03g0482 873 Gene3D Ribonuclease Inhibitor 183 387 IPR032675 -
Dod03g0482 873 SUPERFAMILY L domain-like 257 353 - -
Dod03g0482 873 ProSitePatterns Protein kinases ATP-binding region signature. 615 637 IPR017441 GO:0005524
Dod03g0482 873 ProSiteProfiles Leucine-rich repeat profile. 266 288 IPR001611 GO:0005515
Dod03g0482 873 MobiDBLite consensus disorder prediction 834 858 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0482 Dod-Chr3 5809950 5816335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0482 10 873 Receptor kinase-like Gene Family AT5G49760 47.996 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Dod03g0482 PK_Tyr_Ser-Thr 7.2e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0482 - - gmx:100786172 1053.51