Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod03g0482 | ATGGACCAACAACATAAACTGTTTCCTCTACTGATGCTTCTTGTCCAAGTTCTGCTTGTAACAGCACAGACTTCCAGTCAAGACTATAATGGCCTAGCAGCTTTAACAGGATTCTGGAGAAACAAACCACCAAGTTGGGAGGGACCAGATCCTTGCGGTAATGGTTGGGAAGGAATTCGTTGCACCCGTTCAAGAATCACCCAATTGAAACTATTAGGCATGAATTTGGTGGGTCAGCTGTCTTCAGCAATCCAGTCATTATCTGAATTAGAAATCTTGGATCTTTCTTACAACACGGGTTTGACAGGAACAATTCCACAGGAAATTGGGAGTTTGACAAAGCTAAAATCCCTGGCACTGGTTGGTTGTGGTTTCTCTGGTCCCATTCCAGATTCAATAGGAGCTTTACAGCAGCTCACCTTTCTAGCACTGAACTCTAATAATTTCAATGGAACTATTCCACACTCCATTGGCAATCTGTCCAATATTAATTGGCTAGATATTGCTGATAATCAGCTTGAAGGACCTATTCCTGTCTCTGATAACCAAGGACGACAAGGTCTTGACCTGCTCCTTCAGGCCCAACACTTTCATATGGGGAACAACAAGCTCTCTGGTTCAATACCAGCAAAACTATTCAACTCCAATATGAAACTAATACACGTGCTTTTGGACAGCAATCAACTAGAGGGTAGTATCCCTAGCACCCTTGGAAATGTGGACACATTGCAGGTGGTGCGCTTGGATAGGAATGGATTAATCGAGGGAGTGCCTTCAGAGTTCAAAAGCCTCGGAAACCTTAGTGAACTGTATTTATCCCAAAACAAGCTGAATGGCTCTCTGCCGGACCTTAGTGGAATGGAGAATCTCTTCTATGTGGATATGAGCAAGAATTCTTTCAGTTCTTCTGACGTTCCTCCGTGGGTTTCAAGTTTGCCGTCTCTGACAACAGTGCTACTTGGGGACAACCAGCTGAGTGGCACATTCAATCTTAGCAGTGGCTTTAGCAGCAGTCTGCAAATCATTGATTTGCGGGATAATGAAATAACCAACTACGTGCAGCCAAAACAAAATATAAATTTTCAAGTGGTGCTGGCTGGTAATAAAGTTTGTCTTGAAACTGGTGTTTCACAACAGAGTTACTGCCAACTTCCCCTAAACATTCAGCCATATTCAACACCAGCAAATAATTGTACTCCTCAATCTTGCAACTCCGATCAGGTTTCAAGTCCAAATTGTAAATGTGCATATCCCTATACTGGAACACTGTTCTCCAGAGCTCTTAGTCTGTCAGTCCTTAATGATACTAACTACAAGGATCTTGAGCAATCTCTGTTCGATAGTTTTCAGTCCGAAAAGCTTCCTGTGGATTCAGTTTCTCTGAGTAACCCCTTGAAGAACACATCGAGTGATTATTTTCAATTGACTCTGAGTATCTTCCCATCTCAAACCGATCGTTTCAATAGAACTGGACTTTCGAGTGTTGCTTTCGTGCTTAGCAACCAAATCTTCAAGCCCCCAGAATTTTTCTCCCCTTACTTCTTCAACGGTCTCAACTACGCATACTATGGAGGTGAGCCTGAGGGATCGAAGTCATCACATACTGGTGTTATAATAGGTGCAGTGGTTGCTGTTTTGGTGTTTGTTGTGCTAGCATTCTTTGCAGGGATATATGCCCTCCGCCAAAAGAGAAGAGCATCAAGATCTGAACAGATCAACAACCCTTTTGCGAATTGGGAACTGAACACGAATAGTGGCACTGCTCCTCAGTTGAAAGGAGCAAGATGGTTTTCTTTTGAAGATCTGAAGAAATACACCAACAGCTTCTCAGAAACCAATACTATTGGATCTGGGGGCTATGGAAAGGTTTACCAAGGTGTTCTTCCTGCCGGGGAAATTGTTGCCATCAAACGTGCTGCACAAGAATCTATGCAGGGTGCTCTTGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCACCATAAGAATCTAGTTAGTCTTGTGGGTTTCTGTTTTGAGAAGGGTGAACAAATGCTGGTATATGAGTACATTCCAAATGGCACTATAATGGATAGCCTTACAGGAAAGTCTGGGATCTGGATGGATTGGATAAGAAGGCTGAAAGTAGCACTGGGTGCAGCCCGGGGGTACTTGGATCCTGAGTATTACATGACCCAGCAGTTGACTGAAAAGAGCGATGTATACAGCTTTGGAGTGGTAATGCTTGAACTAGTAACAGCAAGAAGGCCAATAGAGCAAGGAAAGTATATAGTAAGAGAGGTAATGAGGGTAATGGATACATCAAAAGATTTATACAACCTTCATTCCATATTGGATCCAACCATACTCAAAGCGACAAGCCCAAAAGGTTTAGAAAAGTTTGTCGAGCTTGCAATGAGGTGTGTCAAAGAATATGCAGCTCAGAGGCCTACAATGGCTGAGGTTGTAAAAGGGATTGAGAACATAATTGAGCTTGCTGGTGTGAATCCCAATGCTGAATCAGCTTCTACGACAGAAAGTTATGACGTACCACGAGATGGGGATGCCAAACATCCTTACAGCAATGAAGATTTTAGCTACAGTGGAATGTTTCCAACAGCGAAGGTAGAACCTCAATGA | 2622 | 0.4287 | MDQQHKLFPLLMLLVQVLLVTAQTSSQDYNGLAALTGFWRNKPPSWEGPDPCGNGWEGIRCTRSRITQLKLLGMNLVGQLSSAIQSLSELEILDLSYNTGLTGTIPQEIGSLTKLKSLALVGCGFSGPIPDSIGALQQLTFLALNSNNFNGTIPHSIGNLSNINWLDIADNQLEGPIPVSDNQGRQGLDLLLQAQHFHMGNNKLSGSIPAKLFNSNMKLIHVLLDSNQLEGSIPSTLGNVDTLQVVRLDRNGLIEGVPSEFKSLGNLSELYLSQNKLNGSLPDLSGMENLFYVDMSKNSFSSSDVPPWVSSLPSLTTVLLGDNQLSGTFNLSSGFSSSLQIIDLRDNEITNYVQPKQNINFQVVLAGNKVCLETGVSQQSYCQLPLNIQPYSTPANNCTPQSCNSDQVSSPNCKCAYPYTGTLFSRALSLSVLNDTNYKDLEQSLFDSFQSEKLPVDSVSLSNPLKNTSSDYFQLTLSIFPSQTDRFNRTGLSSVAFVLSNQIFKPPEFFSPYFFNGLNYAYYGGEPEGSKSSHTGVIIGAVVAVLVFVVLAFFAGIYALRQKRRASRSEQINNPFANWELNTNSGTAPQLKGARWFSFEDLKKYTNSFSETNTIGSGGYGKVYQGVLPAGEIVAIKRAAQESMQGALEFKTEIELLSRVHHKNLVSLVGFCFEKGEQMLVYEYIPNGTIMDSLTGKSGIWMDWIRRLKVALGAARGYLDPEYYMTQQLTEKSDVYSFGVVMLELVTARRPIEQGKYIVREVMRVMDTSKDLYNLHSILDPTILKATSPKGLEKFVELAMRCVKEYAAQRPTMAEVVKGIENIIELAGVNPNAESASTTESYDVPRDGDAKHPYSNEDFSYSGMFPTAKVEPQ* | 874 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod03g0482 | 873 | Gene3D | Phosphorylase Kinase; domain 1 | 580 | 684 | - | - | |
Dod03g0482 | 873 | Pfam | Protein tyrosine and serine/threonine kinase | 718 | 818 | IPR001245 | GO:0004672|GO:0006468 | |
Dod03g0482 | 873 | Pfam | Protein tyrosine and serine/threonine kinase | 612 | 717 | IPR001245 | GO:0004672|GO:0006468 | |
Dod03g0482 | 873 | PANTHER | RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED | 2 | 717 | - | - | |
Dod03g0482 | 873 | PANTHER | RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED | 717 | 843 | - | - | |
Dod03g0482 | 873 | Gene3D | Ribonuclease Inhibitor | 19 | 182 | IPR032675 | - | |
Dod03g0482 | 873 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 2 | 717 | - | - | |
Dod03g0482 | 873 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 717 | 843 | - | - | |
Dod03g0482 | 873 | Gene3D | Transferase(Phosphotransferase) domain 1 | 687 | 842 | - | - | |
Dod03g0482 | 873 | SUPERFAMILY | L domain-like | 32 | 282 | - | - | |
Dod03g0482 | 873 | ProSiteProfiles | Protein kinase domain profile. | 609 | 873 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dod03g0482 | 873 | SUPERFAMILY | Protein kinase-like (PK-like) | 599 | 824 | IPR011009 | - | |
Dod03g0482 | 873 | Gene3D | Ribonuclease Inhibitor | 183 | 387 | IPR032675 | - | |
Dod03g0482 | 873 | SUPERFAMILY | L domain-like | 257 | 353 | - | - | |
Dod03g0482 | 873 | ProSitePatterns | Protein kinases ATP-binding region signature. | 615 | 637 | IPR017441 | GO:0005524 | |
Dod03g0482 | 873 | ProSiteProfiles | Leucine-rich repeat profile. | 266 | 288 | IPR001611 | GO:0005515 | |
Dod03g0482 | 873 | MobiDBLite | consensus disorder prediction | 834 | 858 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod03g0482 | Dod-Chr3 | 5809950 | 5816335 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod03g0482 | 10 | 873 | Receptor kinase-like Gene Family | AT5G49760 | 47.996 | 0.0 | 811 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VIII-1 | Dod03g0482 | PK_Tyr_Ser-Thr | 7.2e-15 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod03g0482 | - | - | gmx:100786172 | 1053.51 |