Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0469 ATGACATGGTGTAATGAACCTGATGATGAGCAAAGGGGGAATGAATTAATCATGCCCACTGTTAGTACTCCTAGACCTAACAACACTGACATAAAACCCAACCAAGAAATTCGAAACATAACTTGCCCTTCATGCGGCCATAATATTGAATTCCAAGATCAGGGTGGAATTCATGACTTGCCGGGGTTACCAGCCGGAGTCAAGTTTGACCCTAATGATCAAGAAATACTAGAGCATTTGGAGGCAAAAGTGGTGTCTGATGTGCGCAAGCTTCATCCCCTCATTGATGAGTTCATACCAACTCTTGAAGGCGAGAATGGGATCTGTTATACACACCCAGAAAGGCTACCAGGAGTAAGCAAAGATGGCCAGATCCGGCACTTCTTTCACAGGCCTTCTAAAGCATACACAACTGGAACAAGGAAAAGAAGAAAGGTACACACTGATGAAGAAGGAAGTGAAACAAGGTGGCACAAAACAGGAAAAACAAGACCAGTTTTTGTTGGGGGTGACGTAAAGGGTTTCAAAAAGATACTAGTACTCTATACAAACTATGGAAGGCAAAAGAAGCCTGAGAAGACTAATTGGGTGATGCATCAATACCATCTTGGAAGTAATGAAGAAGAGAAAGATGGAGAATTAGTGGCTTCAAAGGTCTTCTACCAAACACAGCCTAGACAATGTGGTAATAATTCCATTATTATAAAGGATCAATATGAAACAATATTGAATAACCAAAGTATTAGCCACGATGAAAGTATAGTATCTAAAAATGCAGTTCCTGTGGACTACTACGGTGCTCCTTACATAAATTATGAACATGTGGGTCATAATAGGGAAAGCTCACCCCAACTTATTCCAAACTTGGTTGTGCAAGGTGATGGATCTTCTTTTTTCCGCTTTGCAATGGATGGGAACAAAGCAAGACTCGAGAGAAAGTAG 942 0.4098 MTWCNEPDDEQRGNELIMPTVSTPRPNNTDIKPNQEIRNITCPSCGHNIEFQDQGGIHDLPGLPAGVKFDPNDQEILEHLEAKVVSDVRKLHPLIDEFIPTLEGENGICYTHPERLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVFVGGDVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVASKVFYQTQPRQCGNNSIIIKDQYETILNNQSISHDESIVSKNAVPVDYYGAPYINYEHVGHNRESSPQLIPNLVVQGDGSSFFRFAMDGNKARLERK* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0469 313 ProSiteProfiles NAC domain profile. 63 222 IPR003441 GO:0003677|GO:0006355
Dod03g0469 313 Pfam No apical meristem (NAM) protein 64 203 IPR003441 GO:0003677|GO:0006355
Dod03g0469 313 SUPERFAMILY NAC domain 58 222 IPR036093 GO:0003677|GO:0006355
Dod03g0469 313 MobiDBLite consensus disorder prediction 136 157 - -
Dod03g0469 313 MobiDBLite consensus disorder prediction 142 157 - -
Dod03g0469 313 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 298 - -
Dod03g0469 313 Gene3D NAC domain 72 226 IPR036093 GO:0003677|GO:0006355
Dod03g0469 313 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 298 IPR044799 GO:0003700
Dod03g0469 313 MobiDBLite consensus disorder prediction 16 34 - -
Dod03g0469 313 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0469 Dod-Chr3 5686006 5689467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0469 1 309 NAC Transcription Factor Family AT1G28470 60.366 8.13e-123 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod03g0469 NAM 4.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0469 - - gmx:100795920 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0469 03 5686006 5689467 Dod03g0469 03 5686006 5689467 ECH
Dod03g0469 03 5686006 5689467 Dod04g1426 04 35731691 35735692 ECH