Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0466 ATGAACCAATTGGAAGGTGAGATTCCCGATGAGTTGTGCAAGTTGCCGCTTGAAAGTCTCAACCTTTACGAGAATCGTTTTGTGGGGGAGTTGCCGGCGAGCATAGCGGAATCGCCGAACCTTTATGATTTGAGGTTGTTTGAGAACAGGCTCACCGGAAAGTTGCCGGAGAATCTCGGGAAGAATGCGCCGTTGAGGTGGGTTGATGTGTCGACGAACCAGTTCTCCGGTCAGATTCCGGCGAGTTTGTGTGATCATGGCCAGTTGGAGGAGCTTCTTATGATATATAACTCGTTCTCCGGCGAGGTTCCGGCGAGCTTAGGCACGTGCACGAGCTTGACGAGGGTGAGGCTTGGTTTCAACAGGTTTTCCGGCGAGGTTCCGGCAGGGTTGTGGGGTCTTCCGCATGTGTCTCTGCTTGAGCTTGTTGACAACTCGTTTTCTGGTTCGATTGCAAAGACCATTGCTGGGGCGAGGAATCTTTCGTCGTTGCTTCTGTCTCAGAACAATTTCACGGGTCCAATGCCTGAGGAGGTTGGATGGTTGAAAACTCTTCAGGAGTTTTCTGGTGACAATAACATGTTTAATGGTTCTTTGCCTGAGAGTATTGTGAATCTTGGGCAGCTTGGGAAGCTTGATCTGCATAACAACAAGCTCTCCGGGGAGCTTCCCAAGGGAATCAAATCATGGAAGAAACTCAATGAGTTGTATTTGGCTAATAATGGGATTGGTGGGGAAATCCCTGATGAAATTGGGAGTTTGTCAGTACTTAATTTTCTTGATCTTTCTAATAACCAGTTTTCCGGGAAAATCCCTCTTGGGTTGCAGAATTTGAAGCTAAATGAGCTCAATTTGTCTTACAATAAGTTGTCCGGCGAACTTCCGCCTATGTTGGCTAAGGATATGTACAGGGCTAGTTTTCTGGGTAATCCTGGTTTGTGTGGGGATTTGAAAGGGCTGTGTGATGGGAGAGGTAAAGATAAGAGTAGAGGCTTTGTTTGGTTGCTGAGAACTATGTTCATTGTTGCCACTTTGGTGTTTGTCATCGGTGTGGTCTGGTTCTACTTCAGGTATAGGATTTTCAAGAACGCGAGAGCTATTGATAAGTCAAAGTGGACATTGATGTCGTTTCATAAACTGGGTTTTGGTGAAGATGAGATCTTGAACTGCCTTGATGAAGATAATGTGATAGGGAGTGGATCTTCAGGGAAAGTTTACAAGGTAGTGCTTAGCAGTGGGGAAGCTGTTGCTGTGAAGAAGATATGGGAAGGGGTCAAGAAGGGAATGGAGAGCGGAGACATTGAAAACGGCCGGGTTCAAGACAATGCTTTCGATGCAGAGGTTGAAACCTTGGGCAAGATCAGGCACAAGAACATTGTCAAGCTGTGGTGCTGCTGCACCACTAAGGATTGCAAGCTCTTGGTGTATGAGTACATGCCAAATGGAAGTCTTGGTGATTTGCTGCATAGCAGCAAAGGAGGTTTGTTGAATTGGCCAACTAGGTATAAGATAGCTGTTGATGCTGCAGAAGGCCTCTCTTATCTGCATCATGACTGTGTCCCTCCAATTGTTCATAGAGATGTGAAATCTAATAATATCTTGTTGGATGGAGACTTTGGTGCAAGGGTGGCAGATTTTGGAGTAGCTAAGGTAGTCGAATCCACCGCGAAAGGAACTAAGTCCATGTCTGTCATAGCTGGGTCTTGCGGGTATATTGCACCAGAATATGCATACACCCTTAGAGTGAATGAGAAGAGTGACATATACAGTTTTGGTGTTGTCATACTTGAGTTGGTAACTGGAAGGAGGCCAGTAGACCCTGAATTTGGGGAAAAAGACTTGGTTACGTGGGTGTGCACGACCTTGGATCAGGAGGGAGTGGAGCATGTGCTTGATTCAAGGCTTGATTCTTGTTTCAAAGAAGAAGTGTGCAAGGTCCTCAACATTGGACTCATGTGCACTAGTCCTCTTCCAATCAACCGGCCTGCAATGAGAAGAGTGGTGAAGATGTTACAAGAGGTTGGCACTGATAACCGAGCCAAGTCAGCCAAGAAAGATGGAAAGTTGTCCCCTTATTACTATGATGATGGGTCAGATCATGGAAGCGTTGCTTAG 2115 0.4624 MNQLEGEIPDELCKLPLESLNLYENRFVGELPASIAESPNLYDLRLFENRLTGKLPENLGKNAPLRWVDVSTNQFSGQIPASLCDHGQLEELLMIYNSFSGEVPASLGTCTSLTRVRLGFNRFSGEVPAGLWGLPHVSLLELVDNSFSGSIAKTIAGARNLSSLLLSQNNFTGPMPEEVGWLKTLQEFSGDNNMFNGSLPESIVNLGQLGKLDLHNNKLSGELPKGIKSWKKLNELYLANNGIGGEIPDEIGSLSVLNFLDLSNNQFSGKIPLGLQNLKLNELNLSYNKLSGELPPMLAKDMYRASFLGNPGLCGDLKGLCDGRGKDKSRGFVWLLRTMFIVATLVFVIGVVWFYFRYRIFKNARAIDKSKWTLMSFHKLGFGEDEILNCLDEDNVIGSGSSGKVYKVVLSSGEAVAVKKIWEGVKKGMESGDIENGRVQDNAFDAEVETLGKIRHKNIVKLWCCCTTKDCKLLVYEYMPNGSLGDLLHSSKGGLLNWPTRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGVAKVVESTAKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPVDPEFGEKDLVTWVCTTLDQEGVEHVLDSRLDSCFKEEVCKVLNIGLMCTSPLPINRPAMRRVVKMLQEVGTDNRAKSAKKDGKLSPYYYDDGSDHGSVA* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0466 704 Gene3D Phosphorylase Kinase; domain 1 375 478 - -
Dod03g0466 704 ProSiteProfiles Protein kinase domain profile. 391 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0466 704 Gene3D Ribonuclease Inhibitor 1 323 IPR032675 -
Dod03g0466 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 523 535 IPR008271 GO:0004672|GO:0006468
Dod03g0466 704 Gene3D Transferase(Phosphotransferase) domain 1 479 696 - -
Dod03g0466 704 PANTHER LRR RECEPTOR-LIKE KINASE 1 686 - -
Dod03g0466 704 Pfam Protein kinase domain 393 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0466 704 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 686 - -
Dod03g0466 704 SUPERFAMILY RNI-like 4 300 - -
Dod03g0466 704 MobiDBLite consensus disorder prediction 679 693 - -
Dod03g0466 704 ProSitePatterns Protein kinases ATP-binding region signature. 397 420 IPR017441 GO:0005524
Dod03g0466 704 SMART serkin_6 391 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0466 704 SUPERFAMILY Protein kinase-like (PK-like) 387 672 IPR011009 -
Dod03g0466 704 MobiDBLite consensus disorder prediction 679 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0466 Dod-Chr3 5663643 5666544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0466 1 704 Receptor kinase-like Gene Family AT1G28440 71.730 0.0 1068
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod03g0466 Pkinase 5.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0466 - - gmx:100810256 1211.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0466 03 5663643 5666544 Dod03g0466 03 5663643 5666544 ECH
Dod03g0466 03 5663643 5666544 Dod04g1428 04 35824937 35829658 ECH