Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0461 ATGGAGGGTGAAGGTGCTTCGGAGGCAGAGAACGACACTCAGAAGAGGGAAGATGATGCTGCTGGTGGTGGTGGTGAAAACAGCAATGAGAACAACAACAATGGAAGCGGCAGCAAAATTGTGAATTCGAGTGAGGGTCAGAGCAAGACCAAGCGCCAGATGAAGACCCCCTTTCAGCTTGAGACGCTAGAGAAAGCTTACGCTTTGGAGACTTACCCTTCGGAGACTATGAGGGCTGAGCTTTCGGAGAAGTTGGGGTTGTCGGATCGGCAGTTACAGATGTGGTTCTGCCACCGCCGGCTGAAGGACAAGAAGGACTTTCCACCCAAGAAGGCCGCAAAGAAGGCGGCACCTGCACCACCTGTGCCGGATTCTCCCCCGGATGACCTGAGGTTGGGCCATGAGCATGTTAATGAATATGGATCCGGGTCAGGTTCGGGCTCGAGCCCGTTTACCCGGCCGGAACTGCGGAATGTGGTGGCCCGATGTGGTGTGCCAGGGTACTACGAGTCACCTGAGGCTATAATGGAGCTTAGAGCAATTGCTTGTGTGGAGGCACAGTTAGGGCAGCCATTGAGGGAGGATGGACCCATTCTAGGAGTAGAGTTTGATCCATTGCCCCCTGGTGCTTTTGGGGCACCCATTGCTGTTACAGAACAGCAGAAGCGACCTAGTCTTGCTTATGACAGTAAAATGTATGAAAGGCATGATGTTAGAACAAATAAGGCCATGGCAAGAACATTACCTGAGTATCCATTTCTTCCTAACCAGCCTGGCATTCGGCCTGATGCTTTTGGACAGTTGAACCCACCTCATTTACATGATCCAATGGAGGGTCCTACCAGAAATCCTTTTCCTATTGGAAATGAACACCTGCCCAAAATTCATGCTACCCAAAGTCATTCTGCTCGTGTTCGCATTTCATCTCAACAAGACAAGCAAGGAATTCCCTATCCATCTCCTCCACGAGATGTTGATGTTGCCCCCCAAAGGGAATCATACACAAACGTGGTGAATGCTGGAGTGAGCTCCCACTTCACTGATCACCCAATTGTTGGCCAAGAAAATCCGTATGCTTTATCTGGTGGACAAGTTGTCCATAACGATACAATATTGCGGATGGAGAGGAAGCGAAAGAGTGATGATGCCAGAATTGCAAGGGAAGTTGAAGCCTATGAGGCAAGGATGCGGAAAGAGCTTGAGAAGCAAGAGAACCTTAGACGAAAGAGTGAAGAGCGATTGAAGAAAGAAATGGAAAGACTAGATCGTGAAAGAAGGAAGGAAGAAGAGAGGTTGATGCGTGAGAGACAACGAGAAGAGGAAAGATCTAAGCGTGAACAAAGGCGGGAAATGGAACGAAGGGAAAAGTTTTTGCTGAAAGAACATTTAAGAGCTGAGAAAAGAAGGAGAAAAGAAGAGCTTCGCAAAGAGAAAGAGGCTGAGAGAAGGAAAGCTGCCCTTGAAAAGGCAACTGCCCGTAGAATAGCTAAAGAATCTATGGAGCTTATTGAGGATGAACAGCTGGAATTGATGGAGTTGGCTGCAGCAAGCAAGGGACTTTCCTCTATTATACATCTTGATCTTGATACTTTGCAAAACATTGATTCATTTAGGGATTCATTGTGTGTTTTCCCTCCTAAGAGCGTAAAGCTGAGAAAGCCTTTTGCTATCCAACCCTGGATTAACTCAGAACAGAATGTTGGCAACCTCCTCATGATTTGGAGATTCTTGATTACTTTTGCTGATGTTCTTGAGTTATGGCCTTTCACTCTTGATGAGTTTGTTCAAGCATTTCATGATTATGATTCAAGATTGTTGGGTGAGATACATGTTGCTCTTCTTAAGGTCATAATAAAGGACATTGAGGATGTTGCAAGGACGCCTTCTACAGGATTAGGAATAAGCCAAAATGGAGCTGCTAATCCTGGAGGTGGCCATCCAGAGATTGTGGAAGGAGCATATGCATGGGGCTTTGACATACGAAATTGGCAGAAGAACTTAAATCAATTGACATGGCCAGAAATTTTCAGACAGTTAGCATTGTCTGCAGGATTTGGACCGCAGCTGAAGAAAAGAAGTATGACATGGTCATATGCAAATGATAAAGATGAGGGGAAAAGTTGTGAAGATATCATTTCTACACTTCGTAATGGTTCTGCAGCTGAAAGTGCAGTGGCAAAAATGCAAGAGAAAGGTCTGTTGGCACCTCGAAGATCAAGGCACAGGTTAACTCCGGGAACAGTTAAATTTGCTGCATTTCATGTTCTCTCGCTGGAGGGTAGCAAGGGTTTGACAGTACTTGAGCTTGCAGAAAAAATCCAGAAATCTGGTCTTCGGGACCTTACAACCAGCAAGACGCCTGAAGCATCAATTTCCGTTGCTTTGACAAGAGATACCAAGCTTTTCGAAAGAATAGCTCCATCAACCTATCGAGTACGTGCTGCATTTAGAAAGGACCCTGCTGATGCTGAGTCCATTCTTTCTGCAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCCAGCTGGTGAAGATGCTGATGATGTTGAAAGAGAAGAAGGGTCGGACAGTGATGAAGTTGATGAGGATCCCGACATTGATGATCTAGTAAATCCTTCAGGTGCAAACCCGAATTCTGAACAGTATGATGACACAAACATTTGCGCATCAAATGGAAAAGAAAATTTGGGTAATGATGTAGAACTCATTCAAAATGAGTTTGAAACCAGTCAGCCTCATTTTCCTGAGAATGGTTCCAAGGAAGCTGATGGTCCTAGTTCTGTTGCCAGACAACCTGCTGCTTGTGCAGATTTGAATGCTGGAAATGTTGATCAAGATAACATGGAAATCGATGAAAGTAAGTCTGGAGAGTCCTGGGTTCAAGGGCTTTCAGAAGGAGAATATTCTGATCTCAGTGTGGAGGAGCGTCTAAATGCTCTCGTTGCATTGGTTGGTGTGGCAAATGAAGGAAATTCAATCCGCGTTGTTCTTGAGGATCGTTTGGAAGCAGCAAATGCCCTGAAGAAGCAAATGTGGGCTGAAGCACAGATAGATAAACTTCGTCTGAAAGATGATAATATTAATAAATCAGATTTTCCAGCACTTATTGGCAATAAAGCTGAAACACAGTACACATATCCTGCTGCAGAGGGCAACCAAAGCCCAATGATTGACATTAATATTAGCAATGTTAAAAATGAAGCATCACCCAGTACTACAGAAAACCAAAAGGCAACTCCTGTTGCACAGGGCTTGCCTGTTGAAAAGTCCCCATTAGTTCTAGATGTGTGCACAGGCACAGGTCCGGATAACCCTCAGTCTCAGGTACCTGCACAATATTCAAAAAGGTCACGTTCACAGTTGAAATCTTATATTGGCCACATAGCAGAGGAGATGTATGTCTACAGGTCTCTACCCCTTGGTCAAGATCGCAGACGAAATCGATATTGGCAGTTTGTTGCATCTACTTCTAGCAATGATCCTGGTTCTGGCAGGATCTTTGTTGAATATCATGATGGCAAGTGGGGACTTATTGATTCTGAAGAGGCCTTTGATGTTCTTTTGACTTCACTGGATTCACGGGGGATCAGGGAGTCTCATTTGCGCTTAATATTGCAAAGGATTGAGAATTCCTTTAAAGAAAATGTTCGAAGGAATACTCAATGTGCCAAAATAGGAAGCAGAAGTGAAGTTTCCATAAAAAGTGAAGATAGTGAAACATATTCCACCCTTGATCACCGTGTTGGGTCTGGCAGTCCCAGCAGTACTCTTCATGGCTTGAACTCCGATACATCAGAAATCTCATCATCCTTCAAAGTTGAGCTTGGAAAAAGTGAGAGTGAGAAGAAAGCTGCCTTAAGAAGGTATCAAGATTTTCAAAAGTGGATGTGGAAAGAGTGCTATAATAAATCAATATTATGTGCAATGAAATATGGGATAAAGAGAAATAAACCTCAGGTGGAAATTTGTGATATCTGTCTCAACCCTTATTTTGTTGAAGACTCCCACTGCAAATCCTGCCACCAGACTTTTCCTGCTAATAATGGGTTTAATTTTTCTAAGCATGCATTTCATTGTGGAGAAAAGTTATCCAAAGATATTGGTGCTTTGGAATCTTCCCTTCCCTCGCGGACAAGATTGCTTAAGGTCCTGTTGGCTTGTATTGAGGCATCTGTTCTGCCTGATGCATTGGGAACAATTTGGACGGATGATATTAGAAAGCACTGGGGCATGAGGTTGAGCAAATCATCCTCTATTGAAGAACTTTTACAGATATTGACCCTGTTTGAGAGGGCTCTACAGCGAGATTTCTTATCATCAAACTTCTCTACAACAGATGAACTATTGGGATCGAGCAATATGTTAGATGGTGCTGCAAATGCTTCTATTGATCCTGAATCAGTTGCCATACTTCCATGGGTCCCACATACCACTGCTGCTCTGTCTCTCAGGCTTTTTGAGATTGATTCATCTATCAATTATGTACAGCTTGAGAGACCCGAGCCATGCAAAGAGAAAGAAGCGAGAGCATTCATAAAGCTTCCTTCAAGATATACTTCCTTTAAATCTAATAGGGAGGTTGAACCAGTAGAGGTAGTCCATGATGTATTCTTTAAACATAAACCTGCTTCCAAGAAAAATGTACGAAGTGGAAACAAGCGTGGACGAGGGTCTAATGATCAAGGACGGGGCAAAAAGCTGTCAAAAAGATTGTGCAAATCCAAACGAGATACTGGACGCCGAAATGTTAAGTTTGCTGAGAATCTAAGTGACAAACTAAAACAGCAGGGACAAGGAGCCCAAGGACCAGCTGGTGGGCGTGGTCGCCGAACAGTCAGGAAACGGAGAGTGGAAAAGAGAGCTGTTGAAGATTTGTTGCTGGGCCATACAGCTGCCAGTCATAGCCCCAAGATTGGTAGAGAACCATTGAGGAGAGACGATGAGGAATGGGATGGTGAGGAGGCAAGTCCCATGACTCCTGTCCATATTGGGGTTGGTGACAATAGTAACAGTGCTGAAGAGGTGGAATCTGATGACAATGCCCAAGCAGTGGAATATGGTCAAGGAAACTGGGAAGTAGGTTTTAATGGTGTCCCACCCAGCAGATGGAGTAGGGACTTCGTTGGAATGAGTGATGAAGATATGGATGCTTCTGAAGATGACAATGACAATGACAATGACAATGGCATTGGAATTGAAGAGAATGAAGAGGAGGATTCAGAGGCAGATGTATTGAGTGAGGGTTCAGATGGCATGGCAAATGGAGTCATAAATGAAGAAGGCTCAGACTCAGCCTTATCTGAAGATTCTTCTGACTAG 5322 0.4412 MEGEGASEAENDTQKREDDAAGGGGENSNENNNNGSGSKIVNSSEGQSKTKRQMKTPFQLETLEKAYALETYPSETMRAELSEKLGLSDRQLQMWFCHRRLKDKKDFPPKKAAKKAAPAPPVPDSPPDDLRLGHEHVNEYGSGSGSGSSPFTRPELRNVVARCGVPGYYESPEAIMELRAIACVEAQLGQPLREDGPILGVEFDPLPPGAFGAPIAVTEQQKRPSLAYDSKMYERHDVRTNKAMARTLPEYPFLPNQPGIRPDAFGQLNPPHLHDPMEGPTRNPFPIGNEHLPKIHATQSHSARVRISSQQDKQGIPYPSPPRDVDVAPQRESYTNVVNAGVSSHFTDHPIVGQENPYALSGGQVVHNDTILRMERKRKSDDARIAREVEAYEARMRKELEKQENLRRKSEERLKKEMERLDRERRKEEERLMRERQREEERSKREQRREMERREKFLLKEHLRAEKRRRKEELRKEKEAERRKAALEKATARRIAKESMELIEDEQLELMELAAASKGLSSIIHLDLDTLQNIDSFRDSLCVFPPKSVKLRKPFAIQPWINSEQNVGNLLMIWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEIHVALLKVIIKDIEDVARTPSTGLGISQNGAANPGGGHPEIVEGAYAWGFDIRNWQKNLNQLTWPEIFRQLALSAGFGPQLKKRSMTWSYANDKDEGKSCEDIISTLRNGSAAESAVAKMQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYRVRAAFRKDPADAESILSAARKKIQIFENGFPAGEDADDVEREEGSDSDEVDEDPDIDDLVNPSGANPNSEQYDDTNICASNGKENLGNDVELIQNEFETSQPHFPENGSKEADGPSSVARQPAACADLNAGNVDQDNMEIDESKSGESWVQGLSEGEYSDLSVEERLNALVALVGVANEGNSIRVVLEDRLEAANALKKQMWAEAQIDKLRLKDDNINKSDFPALIGNKAETQYTYPAAEGNQSPMIDINISNVKNEASPSTTENQKATPVAQGLPVEKSPLVLDVCTGTGPDNPQSQVPAQYSKRSRSQLKSYIGHIAEEMYVYRSLPLGQDRRRNRYWQFVASTSSNDPGSGRIFVEYHDGKWGLIDSEEAFDVLLTSLDSRGIRESHLRLILQRIENSFKENVRRNTQCAKIGSRSEVSIKSEDSETYSTLDHRVGSGSPSSTLHGLNSDTSEISSSFKVELGKSESEKKAALRRYQDFQKWMWKECYNKSILCAMKYGIKRNKPQVEICDICLNPYFVEDSHCKSCHQTFPANNGFNFSKHAFHCGEKLSKDIGALESSLPSRTRLLKVLLACIEASVLPDALGTIWTDDIRKHWGMRLSKSSSIEELLQILTLFERALQRDFLSSNFSTTDELLGSSNMLDGAANASIDPESVAILPWVPHTTAALSLRLFEIDSSINYVQLERPEPCKEKEARAFIKLPSRYTSFKSNREVEPVEVVHDVFFKHKPASKKNVRSGNKRGRGSNDQGRGKKLSKRLCKSKRDTGRRNVKFAENLSDKLKQQGQGAQGPAGGRGRRTVRKRRVEKRAVEDLLLGHTAASHSPKIGREPLRRDDEEWDGEEASPMTPVHIGVGDNSNSAEEVESDDNAQAVEYGQGNWEVGFNGVPPSRWSRDFVGMSDEDMDASEDDNDNDNDNGIGIEENEEEDSEADVLSEGSDGMANGVINEEGSDSALSEDSSD* 1774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0461 1773 MobiDBLite consensus disorder prediction 418 451 - -
Dod03g0461 1773 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 22 1773 IPR044977 GO:0006357
Dod03g0461 1773 MobiDBLite consensus disorder prediction 25 57 - -
Dod03g0461 1773 Pfam Homeodomain 49 105 IPR001356 GO:0003677
Dod03g0461 1773 ProSiteProfiles HARE-type HTH domain profile. 746 815 IPR007759 GO:0006355
Dod03g0461 1773 Gene3D - 33 107 - -
Dod03g0461 1773 MobiDBLite consensus disorder prediction 1544 1773 - -
Dod03g0461 1773 CDD homeodomain 49 100 IPR001356 GO:0003677
Dod03g0461 1773 ProSiteProfiles DDT domain profile. 564 623 IPR018501 -
Dod03g0461 1773 MobiDBLite consensus disorder prediction 301 316 - -
Dod03g0461 1773 MobiDBLite consensus disorder prediction 847 869 - -
Dod03g0461 1773 SMART testlast3 564 623 IPR018501 -
Dod03g0461 1773 SUPERFAMILY Homeodomain-like 37 105 IPR009057 -
Dod03g0461 1773 MobiDBLite consensus disorder prediction 911 931 - -
Dod03g0461 1773 MobiDBLite consensus disorder prediction 106 153 - -
Dod03g0461 1773 PANTHER HOMEOBOX DOMAIN PROTEIN 22 1773 - -
Dod03g0461 1773 MobiDBLite consensus disorder prediction 838 895 - -
Dod03g0461 1773 ProSiteProfiles 'Homeobox' domain profile. 46 106 IPR001356 GO:0003677
Dod03g0461 1773 MobiDBLite consensus disorder prediction 1 60 - -
Dod03g0461 1773 MobiDBLite consensus disorder prediction 8 23 - -
Dod03g0461 1773 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1137 1209 IPR028941 -
Dod03g0461 1773 Pfam HB1, ASXL, restriction endonuclease HTH domain 746 814 IPR007759 GO:0006355
Dod03g0461 1773 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 956 999 IPR028942 -
Dod03g0461 1773 Coils Coil 386 491 - -
Dod03g0461 1773 MobiDBLite consensus disorder prediction 1714 1746 - -
Dod03g0461 1773 MobiDBLite consensus disorder prediction 873 894 - -
Dod03g0461 1773 SMART HOX_1 48 110 IPR001356 GO:0003677
Dod03g0461 1773 Pfam DDT domain 566 620 IPR018501 -
Dod03g0461 1773 MobiDBLite consensus disorder prediction 297 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0461 Dod-Chr3 5619947 5632057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0461 42 1697 Homeobox Transcription Factor Family AT1G28420 49.447 0.0 1326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Dod03g0461 WSD 6.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0461 - - gmx:100777465 2547.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0461 03 5619947 5632057 Dod03g0461 03 5619947 5632057 ECH
Dod03g0461 03 5619947 5632057 Dod04g1432 04 35890997 35901229 ECH
Dod04g1432 04 35890997 35901229 Dod03g0461 03 5619947 5632057 PCT