Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0460 ATGGGGGTGAACTACTATAAGATTTTGCAGGTTGACAAGAATGCCACAGATGAAGATTTAAAGAAAGCTTACAGGAAGCTTGCCATGAAATGGCACCCTGATAAGAACCCAAACAATAAGAAAGAAGCTGAGGCTAAGTTCAAACAAATATCTGAAGCCTATGAGGTTCTAAGTGATCCCCATAAGAGAGCAATTTGTGATCAGTATGGAGAGGAAGTCCTTAAAGGCCAAGTGCCAAGATCTGATGCTGGTGGGGCTTCGTCCTTCCATGCTGGGGATGGCCCAACAATGTTTAGGTTCAATCCCAGAAATGCAGAAAGCATTTTTGCTGAAGTTTTTGGCTTTGCAAACCCTTATGGAGGCATGGGATGTGGTAGGGGAAGGAACATGACGGGTGGATCTTGGGTGTCAAGGTCTTTTGGTGGAATGTTTGGCAATGACATGTTCAGTTCAGTTGGAGAAGGCAGGACCGCAAGTCAAAGTCCACGCAAGGCGCCTCCCATTGAAAATACACTGCCTTGCAGCCTTGAGGAACTCTATAAGGGAACTACCAAAAAGATGAAGATTTCAAGGGAAATTGTGGATGCAAGCGGGAAAGTTTTGCTTGTGGAGGAAATCTTAACCATTGAAATCAAACCTGGCTGGAAAAAGGGAACAAAAATCACTTTTCAGGAGAAAGGAAATCAGCAACCAAATGTCATTGCTGCAGATATAGTGTTTATTATTGATGAGAAGCTTCACAGTTTGTTTACAAGAGATGGCAATGATTTGGTTATGACAGAAGATATATCACTTGTGGAAGCGGAGACACCAACAAGCTACACTGTCCATCTTACAACTCTAGATGGCAGGGATCTGACCATTGCCATAAACAATGTGATTCATCCAAACTATGAAGAGGTTGTCCCCGGAGAAGGTATGCCAATTCCGAAGGATCCTTCAAAGAGGGGTGACCTTAGGATCAAATTCAACATACAAGTCCCAAACAAGATTGATGCTGAAGAGAAAAACCAGAACTAA 1020 0.4294 MGVNYYKILQVDKNATDEDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDPHKRAICDQYGEEVLKGQVPRSDAGGASSFHAGDGPTMFRFNPRNAESIFAEVFGFANPYGGMGCGRGRNMTGGSWVSRSFGGMFGNDMFSSVGEGRTASQSPRKAPPIENTLPCSLEELYKGTTKKMKISREIVDASGKVLLVEEILTIEIKPGWKKGTKITFQEKGNQQPNVIAADIVFIIDEKLHSLFTRDGNDLVMTEDISLVEAETPTSYTVHLTTLDGRDLTIAINNVIHPNYEEVVPGEGMPIPKDPSKRGDLRIKFNIQVPNKIDAEEKNQN* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0460 339 SMART dnaj_3 3 62 IPR001623 -
Dod03g0460 339 SUPERFAMILY Chaperone J-domain 3 100 IPR036869 -
Dod03g0460 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 250 337 IPR008971 GO:0006457|GO:0051082
Dod03g0460 339 CDD DnaJ 4 59 IPR001623 -
Dod03g0460 339 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 336 - -
Dod03g0460 339 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 336 - -
Dod03g0460 339 PRINTS DnaJ domain signature 6 24 IPR001623 -
Dod03g0460 339 PRINTS DnaJ domain signature 24 39 IPR001623 -
Dod03g0460 339 PRINTS DnaJ domain signature 42 62 IPR001623 -
Dod03g0460 339 PRINTS DnaJ domain signature 62 81 IPR001623 -
Dod03g0460 339 Pfam DnaJ C terminal domain 168 328 IPR002939 -
Dod03g0460 339 Gene3D - 167 245 - -
Dod03g0460 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 162 257 IPR008971 GO:0006457|GO:0051082
Dod03g0460 339 CDD DnaJ_C 166 331 - -
Dod03g0460 339 Gene3D DnaJ domain 3 122 IPR036869 -
Dod03g0460 339 Pfam DnaJ domain 4 67 IPR001623 -
Dod03g0460 339 Gene3D - 247 329 - -
Dod03g0460 339 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0460 Dod-Chr3 5612887 5619457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0460 5 74 C2H2 Transcription Factor Family AT1G74250 36.486 1.42e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0460 K09510 - zju:107425032 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0460 03 5612887 5619457 Dod03g0460 03 5612887 5619457 ECH