Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0426 ATGGAGAACAACCCTAGTTCATCCAGAGCCGATAGGAAGTTCATTGAGAGGAATAGAAGAAATCAAATGAAGGCTCTCTACAACAAGCTCAACTCACTTGTGCCTCATCAAAGCTCAAAGGAGACCATTTCACTGCCAGATCAGCTAGAAGAAGCCACAAACTACATAAAGAGGTTACAGGTGAGAGTTGAGAAATTGAAGGACAAGAAGAACACCCTACTAGGAATTGAGAGGCCATATGATAGCATCATGAATGATAGCGGAAGCAGTAGTACTGTTGGGCTTAAATCTCCACAAATTGAGATCCAACAAGTGGGTTTGGCCTTAGAGGTTGTTCTCATAACTGGGTCAGATTGTCACTTCATATTCAATGAGACCATTCGTGCTCTCCGTGAAGAAGGAGCTGATATTGTCAATGCCAGTTACAAAGTTGTTGAAGATGCTGTTTTCCATACAATACACTGCCAGGTGGGGGAATCTCAATCTGCTAATGGAGCTGCGAGGATATCAGAGAGACTGAATAAGCTTGTGTATGATTCTAGCTATATAGTCCCTTTTAGAGTGTAA 567 0.4215 MENNPSSSRADRKFIERNRRNQMKALYNKLNSLVPHQSSKETISLPDQLEEATNYIKRLQVRVEKLKDKKNTLLGIERPYDSIMNDSGSSSTVGLKSPQIEIQQVGLALEVVLITGSDCHFIFNETIRALREEGADIVNASYKVVEDAVFHTIHCQVGESQSANGAARISERLNKLVYDSSYIVPFRV* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0426 188 SMART finulus 13 65 IPR011598 GO:0046983
Dod03g0426 188 PANTHER TRANSCRIPTION FACTOR BHLH162 1 178 - -
Dod03g0426 188 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 5 74 IPR036638 GO:0046983
Dod03g0426 188 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 178 IPR015660 GO:0003700|GO:0006357
Dod03g0426 188 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 7 59 IPR011598 GO:0046983
Dod03g0426 188 Coils Coil 49 76 - -
Dod03g0426 188 Pfam Helix-loop-helix DNA-binding domain 9 60 IPR011598 GO:0046983
Dod03g0426 188 Gene3D - 1 84 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0426 Dod-Chr3 5229317 5230573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0426 3 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 46.409 2.69e-45 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod03g0426 HLH 6.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0426 - - gmx:100814407 260.381