Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0425 ATGGATGAAGATAACAATTCTTGGATAAGGAGGACAAAATTCTCTCATACAGTTTGCCATCGTCTGGATCCTTCCAGATGGAGTTCTATTCCTATCAGCATTGAGCCAGAGCACAATCCAGGCCTGAAATCGAGGCCTGCTTACAAGAGCGTTTCCAATGGCTCGCAGCTTCAGAGAAATCCCTTGACAAACAAGCAGAGATCTTGGTCCCCTTTGCCCAAAACTTCTCTTTCTGAGACCTTCAGGGAAGCTAGACATGAACAAAAGAGGTTCTCAACACCAGGTCCTAGGAGGAATGACTTTAATAAGAGAATTATGGGGAAGTCATCGTACAAGGATTCCGGGGAAATTAAGGTTTCGAGTTTGGAATCGCCTTCCAAAAGTCCAAATGGGCAGGTAAAATTGAGCAACAAGTCGAAGCACCACAAGGACTTGGCGTGGACCAAGTATTTTGACCATGATGGAGGAAAGGTTACTGCGGTGGAAACAGCTGAAGAATGGACGGTTGACCTCTCTAAGCTGTTTCTTGGCCTTAGGTTTGCTCACGGGGCTCATAGTAGGCTTTACCATGGTGTATATAAGGAAGAGCCTGTTGCTGTTAAAATGATTAGAGTACCAGATGATGATGAAAATGGAACCTTGGCTTCTAAGTTAGAGAAACAGTTCATGAGAGAAGTCACCCTTTTATCTCGCCTTCACCATCAAAATGTTATAAAGTTCGTAGCAGCATGCAGAAAGCCACCAGTTTACTGTATTATCACAGAATATCTATCCGAAGGTTCTTTGAGGGCATATTTGCATAAGTTGGAGCGCAAAACTATTTCTCTAGAAAAGCTATTAGCTTTTGCTCTAGATATTGCTCACGGAATGGAATATATTCACTCTCAAGGTGTCATTCATCGAGACCTTAAACCAGAGAATGTCCTCATTAATGAAGACTCACACCTTAAAATTGCTGATTTTGGCATTGCTTGTGAGGAGTCAGCATGTGACGTGTTGGCTGATGACCCTGGTACCTACCGTTGGATGGCACCTGAGATGATTAAACGTAAATCCTACGGGAGAAAGGTTGATGTCTACAGTTTTGGGCTTATGTTATGGGAAATGTTGACTGGAACTATACCATATGAGGAAATGACTCCAATCCAGGCTGCTTTTGCCGTAGTAAATAAGAATTCCAGGCCAGTTATTCCTTCAAACTGCCCGCCTGCTATGCGAGCTTTAATTGAGCAGTGTTGGTCCTCACAACCGGATAAGAGGCCCGAGTTCTGGCAGGTTGTTAAGGTTTTGGAGCAATTTGAATCCTCGCTCGCCCGTGATGGAACCCTGACTTTGGTGCAAAACCTTTGTTGCCAAGATCATAAGAAAGGGCTTCTTCACTGGATTCAAAAGCTTGGTCCTGTGCATCATAATAGTGGCCCTGTACCTAAACCCAAATTCACATGA 1446 0.4378 MDEDNNSWIRRTKFSHTVCHRLDPSRWSSIPISIEPEHNPGLKSRPAYKSVSNGSQLQRNPLTNKQRSWSPLPKTSLSETFREARHEQKRFSTPGPRRNDFNKRIMGKSSYKDSGEIKVSSLESPSKSPNGQVKLSNKSKHHKDLAWTKYFDHDGGKVTAVETAEEWTVDLSKLFLGLRFAHGAHSRLYHGVYKEEPVAVKMIRVPDDDENGTLASKLEKQFMREVTLLSRLHHQNVIKFVAACRKPPVYCIITEYLSEGSLRAYLHKLERKTISLEKLLAFALDIAHGMEYIHSQGVIHRDLKPENVLINEDSHLKIADFGIACEESACDVLADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLMLWEMLTGTIPYEEMTPIQAAFAVVNKNSRPVIPSNCPPAMRALIEQCWSSQPDKRPEFWQVVKVLEQFESSLARDGTLTLVQNLCCQDHKKGLLHWIQKLGPVHHNSGPVPKPKFT* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0425 481 ProSiteProfiles Protein kinase domain profile. 174 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0425 481 Gene3D Phosphorylase Kinase; domain 1 162 258 - -
Dod03g0425 481 MobiDBLite consensus disorder prediction 46 77 - -
Dod03g0425 481 PRINTS Tyrosine kinase catalytic domain signature 292 310 IPR001245 GO:0004672|GO:0006468
Dod03g0425 481 PRINTS Tyrosine kinase catalytic domain signature 357 379 IPR001245 GO:0004672|GO:0006468
Dod03g0425 481 PRINTS Tyrosine kinase catalytic domain signature 338 348 IPR001245 GO:0004672|GO:0006468
Dod03g0425 481 PRINTS Tyrosine kinase catalytic domain signature 254 267 IPR001245 GO:0004672|GO:0006468
Dod03g0425 481 PRINTS Tyrosine kinase catalytic domain signature 401 423 IPR001245 GO:0004672|GO:0006468
Dod03g0425 481 SUPERFAMILY Protein kinase-like (PK-like) 159 430 IPR011009 -
Dod03g0425 481 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 458 - -
Dod03g0425 481 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 458 - -
Dod03g0425 481 MobiDBLite consensus disorder prediction 114 135 - -
Dod03g0425 481 SMART serkin_6 174 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0425 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 298 310 IPR008271 GO:0004672|GO:0006468
Dod03g0425 481 Gene3D Transferase(Phosphotransferase) domain 1 259 456 - -
Dod03g0425 481 Pfam Protein tyrosine and serine/threonine kinase 180 430 IPR001245 GO:0004672|GO:0006468
Dod03g0425 481 MobiDBLite consensus disorder prediction 30 140 - -
Dod03g0425 481 CDD STKc_MAP3K-like 181 430 - -
Dod03g0425 481 MobiDBLite consensus disorder prediction 79 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0425 Dod-Chr3 5183263 5187226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0425 1 481 MAP Kinase Kinase Kinase AT5G58950 56.762 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Dod03g0425 PK_Tyr_Ser-Thr 8.2e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0425 - - gmx:100500590 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1465 04 36334454 36338743 Dod03g0425 03 5183263 5187226 PCT