Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0381 ATGTATAGCATGGATTCATGTTCAGGTTCTTATCAGTGTCATCATCAGCAACCGCAGCTGCCACCGGGGTTTAGGTTCCACCCAACGGATGAGGAACTGATCGTTCACTACCTCAAGAGAAAAGCATCCTCTGCTCCACTCCCTGTTGCCATCATCGCAGAGGTTGATCTCTACAAGTTCGACCCATGGGAGCTCCCAAGTAAGGCAACGTTTGGCGAGCAAGAGTGGTATTTCTTCAGCCCAAGGGATAGGAAATACCCAAATGGGGCGAGGCCAAACAGGGCTGCTACATCTGGGTATTGGAAAGCCACTGGGACTGATAAGCCCATAATGGCATCTGATGGGAGGCACAAAGTTGGAGTCAAGAAAGCACTTGTCTTCTATGGTGGGAAGCCTCCAAGAGGGGTCAAAACCAATTGGATCATGCATGAGTATAGGCTTGCTGACAATTCCTTCGCTTCTACGGCCTCAAAGCCTCCTTCCCTTGCTGCTGATGCTGTCACCAAGAAGAACTCCTTGAGGCTTGATGATTGGGTGTTGTGCCGAATATATAAAAAAAACAACGCGGGGCCAAGGACACCCTTGATGGTTCAGCAGGATAAGGAGGAGACTGTGCTACCAACGATGTCAACTTTGTCAATGGCTAGCAATAATACTTATCACATTAATACCAAACCCACATCTTCGAGAACCTCAAGTTATGGACCGGTACTGGGGCTAGAGAATGATGACAACACCTTCTTCGATGGAATCTTAGCAACAACCGATGATGATCATCATCAGGGCATGCAAAATAATGGTTGTGATTCTCACCTACTCTCCAATTCTTCAAACTCAAAGGGTAATAATAACAACATCCCAATGAAACGGGCACTGGTGCCTTCACAGTTTTGGAACGATACAGCAGGGTCTCCAGGTTCATCTTCTTCAAGCAAGAGGCTCCACTGTGATCTTAATAATGGAAGCAGCACTGCTGAGGAAAACAATTCCTTTGTTTCACTGCTTAGCCAGCTTCCTCATCAGGCCACAACGTTTCACCCAAATACGGTTCTTGGCCCTGTTGGTGATGGTGTATTGAGGCAACAGTTTCAACTTCCAAGCATAAATTGGAACTTGTAG 1119 0.4683 MYSMDSCSGSYQCHHQQPQLPPGFRFHPTDEELIVHYLKRKASSAPLPVAIIAEVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMASDGRHKVGVKKALVFYGGKPPRGVKTNWIMHEYRLADNSFASTASKPPSLAADAVTKKNSLRLDDWVLCRIYKKNNAGPRTPLMVQQDKEETVLPTMSTLSMASNNTYHINTKPTSSRTSSYGPVLGLENDDNTFFDGILATTDDDHHQGMQNNGCDSHLLSNSSNSKGNNNNIPMKRALVPSQFWNDTAGSPGSSSSSKRLHCDLNNGSSTAEENNSFVSLLSQLPHQATTFHPNTVLGPVGDGVLRQQFQLPSINWNL* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0381 372 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 5 344 - -
Dod03g0381 372 ProSiteProfiles NAC domain profile. 20 186 IPR003441 GO:0003677|GO:0006355
Dod03g0381 372 SUPERFAMILY NAC domain 13 186 IPR036093 GO:0003677|GO:0006355
Dod03g0381 372 MobiDBLite consensus disorder prediction 258 322 - -
Dod03g0381 372 MobiDBLite consensus disorder prediction 258 290 - -
Dod03g0381 372 PANTHER NAC TRANSCRIPTION FACTOR 56 5 344 - -
Dod03g0381 372 MobiDBLite consensus disorder prediction 297 322 - -
Dod03g0381 372 Gene3D NAC domain 29 190 IPR036093 GO:0003677|GO:0006355
Dod03g0381 372 Pfam No apical meristem (NAM) protein 21 147 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0381 Dod-Chr3 4600850 4602851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0381 17 371 NAC Transcription Factor Family AT1G61110 50.970 6.37e-110 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod03g0381 NAM 1.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0381 - - gmx:100806369 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1517 04 36997865 37000117 Dod03g0381 03 4600850 4602851 PCT