Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0377 ATGGATAATAATATTGTGTTAAAGCTAACAAATTTCTACACTTGGGCTTTTCTACTTTTTCTATCATTGAAACCTGCTATCTCTTCTAGGCAAAATTATAGGGTTGGTGGGAGGGCATTGAGTTCTGATAATAATGGTGATCTTGTGACTAACTTGCCTGGCCAACCTCCTGTGGATTTCAAGCACTACGCTGGGTATGTCACTGTCAATGAAACCAATGGAAGAGCACTCTTTTATTGGTTTTATGAGGCTGTGAACAAGCCTGAAGAGAAACCATTGGTGTTGTGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTGGGATATGGGGCAACACAGGAGATTGGCCCATTTTTAGTGGACTCAGATGGCAAGGGCCTTAAATTTAATAACTTCTCTTGGAACAAAGAAGCCAATATGTTATTCCTGGAATCTCCTGTCGGAGTTGGCTTTTCGTACTCAGATACAACTAGTGACTATGCACACCTGGGAGATGACTTAACAGCTAATGATGCTTACATTTTTCTGCACAATTGGCTCCTCAAGTTTCCATCATATAGAACAAGGACATTTTACATAGCAGGGGAGAGCTATGCAGGAAAGTATGTACCAGAGCTGGCTGAACTCATCTATGATAGGAACAAGGACCCTTCCCTTCATATTGATCTCAAGGGAATTTTGCTGGGGAACCCTGAAACATCTGATGCTGAGGACTGGTTAGGCCTAGTTGACTATGCTTGGAGCCATGCAGTGATATCTGATGAAACTTATAAAACAATCAGAAGAAGTTGTGACTTTAACAGCAGTGATCCATGGAGTAACAAAGATTGCAGTGATGGGGTGGATGAATTACTTAAACAGTACAATGAAATTGATATCTACAGCCTCTACACCTCTGTCTGCTTTGCCAGTACAGCGCGTTCCAACGATCAACCAAATCAAACTGTGATGAAGCGCTCATCCAAAATGTTGCCTAGGATGATGGGTGGTTATGATCCATGCCTGGATGATTATGCCAGAGCCTTTTATAATAGACCAGATGTTCAGAAGGCCCTCCATGCCAGTGATGGTCACAATCTGAAGAATTGGAGTATCTGCAACAACGATATATACAGTGGATGGAACTGGAACCATTCAAAGCCTTCTGTTATCCCAATATACAGGAAGCTTATTTCAGCAGGGCTCAGGATTTGGGTTTATAGTGGAGATACTGATGGTAGGGTGCCAGTGCTATCGACGAGGTACAGCTTGAGTATCCTAGGTTTGCCCATCACTAAGCATTGGAGGCCTTGGTACCATGAAAAAGAAGTTAGTGGGTGGTACCAAGAATATGAGGGGCTTACATTTGCGACATTTAGAGGAGCTGGTCATGCAGTGCCTTGTTTTAAACCAAGCAACTCACTGACATTCTTCACTTCCTTTCTTCTTGGAGACTCTCCACCATCTACCAGATGA 1452 0.4298 MDNNIVLKLTNFYTWAFLLFLSLKPAISSRQNYRVGGRALSSDNNGDLVTNLPGQPPVDFKHYAGYVTVNETNGRALFYWFYEAVNKPEEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDSDGKGLKFNNFSWNKEANMLFLESPVGVGFSYSDTTSDYAHLGDDLTANDAYIFLHNWLLKFPSYRTRTFYIAGESYAGKYVPELAELIYDRNKDPSLHIDLKGILLGNPETSDAEDWLGLVDYAWSHAVISDETYKTIRRSCDFNSSDPWSNKDCSDGVDELLKQYNEIDIYSLYTSVCFASTARSNDQPNQTVMKRSSKMLPRMMGGYDPCLDDYARAFYNRPDVQKALHASDGHNLKNWSICNNDIYSGWNWNHSKPSVIPIYRKLISAGLRIWVYSGDTDGRVPVLSTRYSLSILGLPITKHWRPWYHEKEVSGWYQEYEGLTFATFRGAGHAVPCFKPSNSLTFFTSFLLGDSPPSTR* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0377 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 141 IPR001563 GO:0004185|GO:0006508
Dod03g0377 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 142 152 IPR001563 GO:0004185|GO:0006508
Dod03g0377 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 446 459 IPR001563 GO:0004185|GO:0006508
Dod03g0377 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 178 203 IPR001563 GO:0004185|GO:0006508
Dod03g0377 483 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 479 IPR001563 GO:0004185|GO:0006508
Dod03g0377 483 Gene3D - 333 370 - -
Dod03g0377 483 PANTHER CARBOXYPEPTIDASE 11 479 - -
Dod03g0377 483 Gene3D alpha/beta hydrolase 44 302 IPR029058 -
Dod03g0377 483 Gene3D - 382 476 - -
Dod03g0377 483 Pfam Serine carboxypeptidase 53 474 IPR001563 GO:0004185|GO:0006508
Dod03g0377 483 ProSitePatterns Serine carboxypeptidases, serine active site. 192 199 IPR018202 GO:0004185
Dod03g0377 483 SUPERFAMILY alpha/beta-Hydrolases 44 477 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0377 Dod-Chr3 4471701 4475347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0377 338 477 Calmodulin-binding Proteins AT2G22960 31.206 3.21e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0377 K16297 - gmx:100819700 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0377 03 4471701 4475347 Dod03g0377 03 4471701 4475347 ECH
Dod03g0377 03 4471701 4475347 Dod03g0853 03 10570576 10574212 ECH
Dod04g1518 04 37013543 37018107 Dod03g0377 03 4471701 4475347 PCT