Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0371 ATGGTTTGTACGAATTCCGAGTTGCATGTTCGAACCTTTGTCATGTTGATGGTGATTCTTGCGGGAACTTTCTGTGTTGTTGGGGACACTGACATGGTTGATGTTGCAGCAATCAATAGTCTATATGTTGCTCTGGGCTCACCACCTTTTCTAGGATGGAAGCCTGTGGGAGGAGATCCATGTTTTGAACTGTGGCAAGGTGTCGGTTGTGTCTTCTCCAGTATCACTTCCATAAGACTTGGAAGTATGAACTTGGGTGGACAGCTGGGCAGTAATTTGAATTTTCCATCCATCTTGGAAATTGATCTTAGTAACAACCACATTGGAGGGGTCATTCCATTCACTTTGCCTCCTACGCTGAGGAGCTTGAGTCTCTCAGGAAATCAGTTAAATGGAAGCATTCCAGATGCCTTTTCCTTACTAACTCAATTGATCTACTTGGATTTGTCAAGTAACAACTTGAGTGGTCAGCTGCCTTCATCGACAGGGAGTTTATCATCCCTTACCACATTATACTTGCAGAACAATCAGCTTTCTGGGACCCTTTATGTTTTGCAGGACCTGCCTCTTCTGGATCTGAATATTGAGAATAACTTGTTCTCTGGGCCTATTCCTCCAAAATTGCTGAGTATCCCTATTTTCAGAAAAGATGGGAATCCATTTAATACTAGTGTTATTCCATCACCTGCTGTAGCCCCTTCACCTGTAGCTATGCCTCCATCCCCTGGAAAATTACCTTGGAAAGTGGCAAATAGTCCTTCTTCCTTGACAGCACCGATGCATGCAAGTGTTAGGAAGTCCTTCATAGCTAAGAACATCATTTGGATTGCTTGTGGTGGTTTTTTAATATTTATTGCATTAGGAGTTTGTCTTTTTATGTTGTGTTGCTTTAAGAGAAGACAAGAGAAGAAAACAGCTAAGAAACAAGATGTGGGTGTTTTTGACAGTCCTTTGCATAAACCTACATGCACTGATACTTCCTTTGAAGCAAATAATCAGGAGGAGAAAGCAGCTGAGAAACCATCACTTGTATATGAAGTGCCAAATAGAAGAAAGAATTTGATTCCAAAAAAAAAAGTGAAAACAGCATCTGCAACTTCAGAATACAGTCATGTTTCCGAGTTAATCAACCCTGGTGACACTTCCAAACTTTCACCCCTGCAGCCTCCGCCTAGTCCTCTCCCAACCATTCCTGCTGAGAAGGTCATCTTAAATCCTGATATACCTGCCAAATTATTGGCTGTGAGGAAACTGGATGCCACTGCTTCCATGGAGCAGAATCATGAACAATTTCTTCAACTAGTGTCCAGCATCTCAAGAATTCAGCATACCAATATTGTAAAGTTTATAGGCTACTGTGCTGAGTTTAGCCAACGACTACTTGTATATGAGTATTGCACTAATGGGACCCTGCATGATGCACTGCACGGGGATGATGAACACCGTATTAAACTAACATGGAGTGCACGCATTCAGGTGGCACTTGGAGCTGCAAGAGCTTTAGAGTATCTGCATGAGAACTTTCAGCCACCTATTGTGCATCGAAATTTTAAGTCTGCGAATGTTCTTCTGAATGACAAGCTGGAAGTGTGTGTTGCTGATTGTGGATTAGGTCCTTTGCTATCTTCTGGCTCTGCTGGTCAGTTGTCAGGACGACTTCTCACAGCTTATGGTTACAGTGCTCCAGAATTCGAGTCTGGAAGTTATACACACCAAAGCGATGTCTTCAGTTTCGGAGTTGTAATGCTGGAACTCCTCACCGGACGAAAATCCTACGACAGGTCACTGCCTCGTGGGGAGCAAATTTTGATCAGGTGGGCAGTCCCTCGACTCCATGACATTGATGCATTGTCAAAAATGGTTGACCCCTGCTTAAACGGAGCCTATCCTAGGAAGTCCTTGTCGCGATTTGCAGATATTGTTTCTTCATGTGTGCAGCGTGAACCTGAATTCCGGCCAGCGATGTCAGAAATTGTTCAAGATCTTCTGCGAATGATGCAAAGGGACATGTAG 2013 0.4332 MVCTNSELHVRTFVMLMVILAGTFCVVGDTDMVDVAAINSLYVALGSPPFLGWKPVGGDPCFELWQGVGCVFSSITSIRLGSMNLGGQLGSNLNFPSILEIDLSNNHIGGVIPFTLPPTLRSLSLSGNQLNGSIPDAFSLLTQLIYLDLSSNNLSGQLPSSTGSLSSLTTLYLQNNQLSGTLYVLQDLPLLDLNIENNLFSGPIPPKLLSIPIFRKDGNPFNTSVIPSPAVAPSPVAMPPSPGKLPWKVANSPSSLTAPMHASVRKSFIAKNIIWIACGGFLIFIALGVCLFMLCCFKRRQEKKTAKKQDVGVFDSPLHKPTCTDTSFEANNQEEKAAEKPSLVYEVPNRRKNLIPKKKVKTASATSEYSHVSELINPGDTSKLSPLQPPPSPLPTIPAEKVILNPDIPAKLLAVRKLDATASMEQNHEQFLQLVSSISRIQHTNIVKFIGYCAEFSQRLLVYEYCTNGTLHDALHGDDEHRIKLTWSARIQVALGAARALEYLHENFQPPIVHRNFKSANVLLNDKLEVCVADCGLGPLLSSGSAGQLSGRLLTAYGYSAPEFESGSYTHQSDVFSFGVVMLELLTGRKSYDRSLPRGEQILIRWAVPRLHDIDALSKMVDPCLNGAYPRKSLSRFADIVSSCVQREPEFRPAMSEIVQDLLRMMQRDM* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0371 670 PANTHER LEUCINE RICH REPEAT KINASE 2 410 669 - -
Dod03g0371 670 PANTHER LEUCINE RICH REPEAT KINASE 2 12 144 - -
Dod03g0371 670 Pfam Protein tyrosine and serine/threonine kinase 413 662 IPR001245 GO:0004672|GO:0006468
Dod03g0371 670 SUPERFAMILY L domain-like 34 209 - -
Dod03g0371 670 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 410 669 - -
Dod03g0371 670 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 136 325 - -
Dod03g0371 670 SUPERFAMILY Protein kinase-like (PK-like) 411 663 IPR011009 -
Dod03g0371 670 Gene3D Ribonuclease Inhibitor 36 231 IPR032675 -
Dod03g0371 670 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 12 144 - -
Dod03g0371 670 PANTHER LEUCINE RICH REPEAT KINASE 2 136 325 - -
Dod03g0371 670 Gene3D Transferase(Phosphotransferase) domain 1 467 670 - -
Dod03g0371 670 Gene3D Phosphorylase Kinase; domain 1 404 466 - -
Dod03g0371 670 ProSiteProfiles Leucine-rich repeat profile. 119 141 IPR001611 GO:0005515
Dod03g0371 670 ProSiteProfiles Protein kinase domain profile. 370 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0371 670 Pfam Leucine rich repeat 118 178 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0371 Dod-Chr3 4389023 4399719 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0371 30 669 Strubbelig Receptor Gene Family AT4G03390 47.051 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Dod03g0371 PK_Tyr_Ser-Thr 6.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0371 - - ahf:112783685 1006.51