Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0351 ATGAAGTTCAACCCAAGAGTGTCGAGCAGCCGCCGCAAGAGCCGCAAGGCTCACTTCACGGCGCCGTCGAGCGTCCGCCGCGTGCTGATGAGCGCCCCTCTCTCCACCGACCTCCGTTCCAAGTACAACGTGCGGTCCATGCCGGTGAGGAAGGAGGACGAGGTGCAGGTCGTTCGCGGTACCTACAAGGGCCGCGAAGGGAAGGTGACGCAGGTTTACAGGCGCAAGTGGGTGATCCACATCGAGCGCATCACAAGGGAGAAGGTGAACGGCTCCACCGTCAATGTAGGGATCCATCCTTCCAAGGTTGTCATCACCAAGCTCCGCCTCGACAAGGACCGCAAGTCGCTCTCGACCGCAAGGCCAAGGGCCGCGCCGCCGCTGATAAGGAAAAGGGCACCAAGTTCGCTCCCGAGGATATCATGCAGACCGTTGATTAGTTAG 444 0.6059 MKFNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSTDLRSKYNVRSMPVRKEDEVQVVRGTYKGREGKVTQVYRRKWVIHIERITREKVNGSTVNVGIHPSKVVITKLRLDKDRKSLSTARPRAAPPLIRKRAPSSLPRISCRPLIS* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0351 147 SMART kow_9 48 75 IPR005824 -
Dod03g0351 147 Pfam KOW motif 53 82 IPR005824 -
Dod03g0351 147 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 1 121 IPR005756 GO:0003735|GO:0006412|GO:0015934
Dod03g0351 147 MobiDBLite consensus disorder prediction 1 20 - -
Dod03g0351 147 CDD KOW_RPL26 53 105 IPR041988 GO:0003723
Dod03g0351 147 PANTHER 60S RIBOSOMAL PROTEIN L26-1 1 121 - -
Dod03g0351 147 TIGRFAM rplX_A_E: ribosomal protein uL24 8 117 IPR005756 GO:0003735|GO:0006412|GO:0015934
Dod03g0351 147 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 8 117 IPR005756 GO:0003735|GO:0006412|GO:0015934
Dod03g0351 147 Hamap 50S ribosomal protein L24 [rplX]. 9 121 IPR005756 GO:0003735|GO:0006412|GO:0015934
Dod03g0351 147 SUPERFAMILY Translation proteins SH3-like domain 8 116 IPR008991 -
Dod03g0351 147 ProSitePatterns Ribosomal protein L24 signature. 52 69 IPR005825 GO:0003735|GO:0005840|GO:0006412
Dod03g0351 147 Gene3D - 1 128 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0351 Dod-Chr3 4176556 4179190 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0351 1 126 Cytoplasmic Ribosomal Protein Gene Family AT3G49910 83.594 2.59e-74 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0351 K02898 - gmx:100788996 214.157