Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0347 ATGGCCATTAACATTCTTGGGGCAATCACGGGTGTTATGAGCTGCCTCTGTGCACATAACTGTCTCCATGAATCACTTGGCCATAAGATTAGGCACCTCAGAAGACCCAAAAGGAACTTGAACAAGCTCAAGGCATTGACAGAGGAGCTAGATGCCCGGAAAGTGGATGTGTGCACTAAGCTAAATCAAATGTGGCTTCAAAAAGGGATGAATCCAAAGACTGCAGTGGAACTGTGGCTGAAAAATGTTGATAAGATTGCAAGTGAAGCAAATAAACTCATAAGGAAAGTTGAAGAAGAAAGTGGAAGCACGGGTGTTTTCTCTCCATTTTATGTTACTTCAAGAATAAAGTTGGGAGAACTAATTGAGAAAAAGATGGTGGAGGTGAGAGAGCTTCTAGAGAAGGGTCAATTTGCAGATGATTCATTGGCAGAAACTTCACCCAGAAAAGGGCAAACCCTTCCTACAACAAAGCTGATGGAACATGGAACAACCATGAAAAGTTTGAACAAGATTTGGAACTACATATTGGATGATAGGGTGAGGAAAATTGGTGTTTATGGGATGGGTGGAGTGGGGAAAACAACTATCATGACTGAAATTAACAATAGTCTATTGAGAGAAAATAGGCTATTTGATAGTGTTATTTGGGTTAGTTCTCCAAAGGACATGAACCCTGAAAAGTTACAAAAGGTTATTGCAGAGAAGTTTGATATAGACCTTTCAGGATTTCAGGATGAGACTTCAAGAGCTGCTGCACTGTTTGAAGCTTTCCAAAGAAGGAAAAAGTTTTCCTTGATTCTGGATGATCTGTGGGAGCCATTCTCTCTTGAAAGAGTTGGAATACCTATACCAACCATAGAGAATGGTTGCAAATTACTATTAACTACTCGAAGGTTAAGTGTTTGCCGGGGCATGGAAACAGATAGGGATGTAAAAGTGAAGGTTCTCACAGACAATGAAGCATGGGATCTCTTCAGGGACAAAGTGGGAGATGAAGCATTAGCCTCTCCAGATATACAACTGATTGCGAAAAGTGTGGCAAAAGAATGCATGGGTTTGCCTCTTGGTATTGTCACTGTGGGGCGTTCCCTGAGAAATGCAACTGATATTTCTGAATGGGAGATTTCATTGGTGGGGTTAAGAGCTTCTGCAGTCAATATAGAACAAATGGAAGAATCAGTTTTCTCTCGTCTGAAGTTCAGCTTCACAAAGTTGAAGGATGACACAAGTAGGTCTTGTTTTCTTTTCTGTGCTCTCTACCCAGAAGGTAATCACATTGATGCAAATGAGTTGATTGAGTATTGGATGTGGGAAGGTTTATTAGGTCCTGTGGATAGCATATCAACAAGCAAACAAAAGGGGAAAATCATATTGAATGAACTGAAGTATGCATGCATGTTGCAAAGTGATAAAGAAAATGGGAGCGAATGTGTCAAGATGCATGATTTAATAAGAGATATGGCCATGACCATCATGAGAACAGATCCTCGTTGGCACTGCATTGTCAAAGCTGGCAATGGACTGACGAAACCTCCACACATCGATGAATGGACAGAAGGTGTTCAAAGGGTGTCACTAATGAAGAATGACTTAAAAAATATCTTTCTTGGCAATCCTCCACCATGTCCCGGAGTTACTTCCTTGTTATTGCAATACAATTCTTTCCCTCAAAATATACCATATGACTTCTTTGATTTCATACAAAGCCTAAAGGTTCTTGATCTCTCTTACACCGGGATTGATTCCCTCCCCGGATCGGTTGCTAACTTAGAGAATCTATGTGCCTTGTTATTGAGCAATTGCTGGAATTTAAGATCACTCCCTTCTCTAGCCAAACTCATCAAGTTGATGGCTTTGGACCTTTCTTGTTCCCGAAACATAAAAGAACTTCCACATGGGACAGAGCAGTTAGGCAACCTGAGAAGGCTAAACATTTCCAATACCATGATAAAAATCTTGCCATCTGGATTGCTGTCAGCATTAACTCTTCTTGAAGAGTTATTGGCATCTAATGCTCTAGATTTTCAAACACCATCGCCACCAACCAGTTCTGAAATCAGCATTGTCGACATCATATCCTCCTCAAGTTTATCTTCACTTGAAGTGGACTTCGGGCATCTTGACCTCTACGATCAATATACTAGATCTGGTCACTGGGCTCAGCTAGATAAGTTCATGTTTAATGTTGGACCAGGAGAGCTCCAAGAAGTTTCAGAGAATAGGAGTGTGGCATTTCTTGCCATATCCGTTGCCAACGGGGAGATTTTAATCCCAGCGAATACTAGTGAGTTGAAGTTTATTGATTGTCATGATATTACAGAGCTAACTACTTGCCTTTTGCATGTAGAGAAGCTTAAAAAATGTACACTAGTATGCTGTTACAGTGTAGAGAAAATTGTTGACCCTGGGCAGAATGATCTATCTATGTTGGAGACTTTGGTGCTGAGATATTTGATAAATTTGCAGATTATATGCAGTGAAGTGGTGAATCCATCTACACTTATGAGCCTAAAGATCATAAATGTAGAATGCTGTCCAAATTTGAAGAGTCTATTCCCAGGGAACCTCTTGCTGCAACTGTTAAATCTTGAAGAAATTAGAGTCAGCCACTGTAACAGCATGGAGGATTTGGTGAGATGGGAAGGAGGAGGCAATATTCATGCTGCTAAAATCCACTTTCCAAAATTAAGGAAGTTGAGGTTGGAGGTTATGCCTAGGCTAAAGGGAATATATGGTGGATTCATCAGTTTTGGCTCTCTATGCTCATTTCATGTAATTTCTTGTGATGCACTGAAGAGGCTACCCTTTGATCTAGATGATACAATAGGCCTTCACCATCAGCAAGTAATGGAAATCAAAGGAACAAAATACTGGTGGGAGTCACTTGAGTGGGATGATCATGCTGCCAAGCAAATAATGCAAGCATATTTCATAGAACTGCCAGTGTCAGATCAAGTTGGTAGCAGCAGCAGCCAAGCAGGACCAGCTGAGATAGAGCAGTTTTAA 3009 0.4074 MAINILGAITGVMSCLCAHNCLHESLGHKIRHLRRPKRNLNKLKALTEELDARKVDVCTKLNQMWLQKGMNPKTAVELWLKNVDKIASEANKLIRKVEEESGSTGVFSPFYVTSRIKLGELIEKKMVEVRELLEKGQFADDSLAETSPRKGQTLPTTKLMEHGTTMKSLNKIWNYILDDRVRKIGVYGMGGVGKTTIMTEINNSLLRENRLFDSVIWVSSPKDMNPEKLQKVIAEKFDIDLSGFQDETSRAAALFEAFQRRKKFSLILDDLWEPFSLERVGIPIPTIENGCKLLLTTRRLSVCRGMETDRDVKVKVLTDNEAWDLFRDKVGDEALASPDIQLIAKSVAKECMGLPLGIVTVGRSLRNATDISEWEISLVGLRASAVNIEQMEESVFSRLKFSFTKLKDDTSRSCFLFCALYPEGNHIDANELIEYWMWEGLLGPVDSISTSKQKGKIILNELKYACMLQSDKENGSECVKMHDLIRDMAMTIMRTDPRWHCIVKAGNGLTKPPHIDEWTEGVQRVSLMKNDLKNIFLGNPPPCPGVTSLLLQYNSFPQNIPYDFFDFIQSLKVLDLSYTGIDSLPGSVANLENLCALLLSNCWNLRSLPSLAKLIKLMALDLSCSRNIKELPHGTEQLGNLRRLNISNTMIKILPSGLLSALTLLEELLASNALDFQTPSPPTSSEISIVDIISSSSLSSLEVDFGHLDLYDQYTRSGHWAQLDKFMFNVGPGELQEVSENRSVAFLAISVANGEILIPANTSELKFIDCHDITELTTCLLHVEKLKKCTLVCCYSVEKIVDPGQNDLSMLETLVLRYLINLQIICSEVVNPSTLMSLKIINVECCPNLKSLFPGNLLLQLLNLEEIRVSHCNSMEDLVRWEGGGNIHAAKIHFPKLRKLRLEVMPRLKGIYGGFISFGSLCSFHVISCDALKRLPFDLDDTIGLHHQQVMEIKGTKYWWESLEWDDHAAKQIMQAYFIELPVSDQVGSSSSQAGPAEIEQF* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0347 1002 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 418 IPR027417 -
Dod03g0347 1002 Gene3D - 316 402 IPR042197 -
Dod03g0347 1002 PANTHER OS12G0491200 PROTEIN 26 971 - -
Dod03g0347 1002 Gene3D - 403 491 IPR036388 -
Dod03g0347 1002 Coils Coil 80 100 - -
Dod03g0347 1002 PANTHER DISEASE RESISTANCE PROTEIN RP 26 971 IPR044974 GO:0006952
Dod03g0347 1002 Gene3D - 145 314 IPR027417 -
Dod03g0347 1002 PRINTS Disease resistance protein signature 612 628 - -
Dod03g0347 1002 PRINTS Disease resistance protein signature 258 272 - -
Dod03g0347 1002 PRINTS Disease resistance protein signature 183 198 - -
Dod03g0347 1002 PRINTS Disease resistance protein signature 351 365 - -
Dod03g0347 1002 Gene3D Ribonuclease Inhibitor 768 952 IPR032675 -
Dod03g0347 1002 SUPERFAMILY L domain-like 478 956 - -
Dod03g0347 1002 Pfam NB-ARC domain 167 403 IPR002182 GO:0043531
Dod03g0347 1002 Gene3D Ribonuclease Inhibitor 502 725 IPR032675 -
Dod03g0347 1002 Pfam Leucine rich repeat 544 602 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0347 Dod-Chr3 4154793 4158472 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0347 181 664 WRKY Transcription Factor Family AT5G45050 21.862 2.68e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0347 - K13459 aprc:113852063 996.112