Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0338 ATGGCTTCTGCTTCGTGTTCTTCTGGTACGACGTCGTCGAAGCTGTGCTTCAATTCTGACTGCAACGAGTTCAAGTCCCAACCACCTAAGAAAGGTTGGAGACTCCGTACCGGTGACCTTGCCGAGCTTTGCGATCGATGCGGCTCCGCTTTTGAAGAAGGGAGATTCTGTGAAATTTTTCACTCAAATGCATCTGGTTGGAGGAATTGTGAGACTTGTAGGAAGCGGATTCATTGTGGATGTATTGTTTCAAGCCATACCTTTGTGTTGTTGGATCCTGGAGGAATTGAATGCTTTGCATGTGCCCGCAAACATATTGTTTTGCCGTCTAATCCGCCATGGCAACAAACTTTTTCCATTCAAAGTCGTTTATCGGAAAGAATTAGAGACTTGTCTGGAAAAACTTGGAGTCAATTAGCTGGATCAGGTCCTGTACCATGGAAACAAGCACCAAGTCTGTTCAATTCAGTTTCTTCATCTGACCTGCATCCAGATGTGCCGTCTCTACTTGAATTATCGAATAGCATTGAAAAAATTTATGTCAATGAAAGGTTACCTGCCTCATCCATGGAAAAGAAAAGCGAGGATTTGGCTGGAATATCAACTAATTGGGGTGTTAAGCTTGGTTCACAGGAAATGATGCTCATGAATGGAATGAGGAATGAGGACAAATCAAGTTCATGTTTAAATATGTGCCAACAGCCTCCTTCTCTGAAGGAAGATTCATCTGCTCAACCCTTTGGTCTGTCTGTACCTCATGCATCTCCAAATGAAAGAAATGGTCACATTGCGATAACTGGAAGTCATCCACAACAAACTCCACCTCCTCCAGGAAAGCAATTTAGTGGCACTATGCATTTAGCACTTGACTCATCAGTTGAAGCTCCGGCTTACTTCCCAGCAATTTCTCAGCCTGAAGGATTGCCACTTAAAATCCTCGATGCAAAAGGCAAGGAATGGATATTTCAGTTTCGCTTCTGGCCCAACAATAACAGCAGAATGTATGTTTTAGAGGGTGTCACTCCCTGCATACAGTCAATGCAGTTGCAAGCAGGTGACACAGTAACATTTAGCCGGTTGGAGCCAGAAGGAAGGTTGGTTATGGGGTTTAGAAAGGCTTCAAGTGCTGCGCCATCCGATCAGGACAACGAAACAAATAAGACTGGAAATGGATTTTCTGTGCATGGTGAAGTTGAGTTGGCTGATCCTAGTTCGTGGTCGAAAGTTGATAAATCTGGATACATAGCAAAAGAAGCACTGGGGAGCAAATCTTCAATTTCTAGAAAGAGAAAGAGCAACATCTTGAGTTCAAAGAGTAAACGTCTAAGACTTGAAAATGAGGATCTAATAGAGCTGAAGATTACTTGGCAAGAAGCTCAAGGCCTGCTCCGACCCCCTCTTAGCCATGTTCCGAGCATTGTGGTGATTGAAGGTTTTGAATTTGAGGAATATGAGGATGCTCCAGTGCTTGGGAAGCCTACAATTTTCACCACTGATGATATGGGTGAAAAGATCCAGTGGGCTCAATGTGAAGATTGTCTCAAGTGGCGCAAATTGCCAGCAAGTGCACTTCTTCCTTCAAAATGGACGTGTTCAGATAATTCATGGGACCTGGAAAGATCTTCTTGTTCAGCTGCTCAAGAGCTGACAGCAGAAGAACTTGAGAATTTGCTACCACCTTGTAATTCAGCTGTTTCCAAGAAAATGAAGGCTACCAAGCAAGATCCTGATAATGCTGAAGCTTTGGAGGGACTTGACACACTTGCAAATTTAGCTATCCTGGGAGAGGGTGAGGCACTCCCAACATCTGCTCAAGCCACAACTAAACACCCAAGGCATAGACCTGGCTGCTCTTGCATTGTTTGCATTCAACCTCCCAGTGGAAAGGGCCCCAAGCATAAGCAGACATGCACATGTAATGTCTGCTTAACGGTGAAACGTCGTTTCCGTACTTTAATGTTGCGGCGTGAAAAGAAACAATCAGAAAGAGAAGCAGAGACTACACGTAAAAAGCAGCAACAGCATCCTCAACCATTACCTTCGTCCGAAATTTTGCTTGATGATGATTCGCTGCCTTGTAGTAACACAGGTGATAGTAGTAGCCTAAACCAGAACAAGGAGGGCAATGAGATTTCTGATGATGATCCACACCAGGTAAAATCATCCGCCTCGCCATTCAAAGGCCAAATTGACCTCAATATCCAGCCAGAACGAGAAGAAGAGTTATCACCTGGTTCAGATTCTGGTGGCATAATGAAGTTGCTCCAGGATGCTTCTGAGAGGTATCTCAAGCCGCAGACTACACCGAATTCTGGAGATACATCAGGCAGCCAGTCACATCAGGTTGTGGATGGAGTGAGAGAAGAGAAACCTAGCAATGGTGTAGCTCATTGCAGTAGTAGCAAGGAACATGCCCAAACTTTGTCTATGAATGTATGA 2439 0.4432 MASASCSSGTTSSKLCFNSDCNEFKSQPPKKGWRLRTGDLAELCDRCGSAFEEGRFCEIFHSNASGWRNCETCRKRIHCGCIVSSHTFVLLDPGGIECFACARKHIVLPSNPPWQQTFSIQSRLSERIRDLSGKTWSQLAGSGPVPWKQAPSLFNSVSSSDLHPDVPSLLELSNSIEKIYVNERLPASSMEKKSEDLAGISTNWGVKLGSQEMMLMNGMRNEDKSSSCLNMCQQPPSLKEDSSAQPFGLSVPHASPNERNGHIAITGSHPQQTPPPPGKQFSGTMHLALDSSVEAPAYFPAISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGRLVMGFRKASSAAPSDQDNETNKTGNGFSVHGEVELADPSSWSKVDKSGYIAKEALGSKSSISRKRKSNILSSKSKRLRLENEDLIELKITWQEAQGLLRPPLSHVPSIVVIEGFEFEEYEDAPVLGKPTIFTTDDMGEKIQWAQCEDCLKWRKLPASALLPSKWTCSDNSWDLERSSCSAAQELTAEELENLLPPCNSAVSKKMKATKQDPDNAEALEGLDTLANLAILGEGEALPTSAQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFRTLMLRREKKQSEREAETTRKKQQQHPQPLPSSEILLDDDSLPCSNTGDSSSLNQNKEGNEISDDDPHQVKSSASPFKGQIDLNIQPEREEELSPGSDSGGIMKLLQDASERYLKPQTTPNSGDTSGSQSHQVVDGVREEKPSNGVAHCSSSKEHAQTLSMNV* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0338 812 MobiDBLite consensus disorder prediction 688 707 - -
Dod03g0338 812 ProSiteProfiles Zinc finger CW-type profile. 501 551 IPR011124 GO:0008270
Dod03g0338 812 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 385 749 - -
Dod03g0338 812 MobiDBLite consensus disorder prediction 372 394 - -
Dod03g0338 812 ProSiteProfiles B3 DNA-binding domain profile. 310 374 IPR003340 GO:0003677
Dod03g0338 812 MobiDBLite consensus disorder prediction 655 671 - -
Dod03g0338 812 Gene3D - 505 558 - -
Dod03g0338 812 Gene3D - 285 377 IPR015300 -
Dod03g0338 812 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 295 387 - -
Dod03g0338 812 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 11 293 - -
Dod03g0338 812 Pfam CW-type Zinc Finger 506 548 IPR011124 GO:0008270
Dod03g0338 812 MobiDBLite consensus disorder prediction 794 812 - -
Dod03g0338 812 SMART B3_2 281 374 IPR003340 GO:0003677
Dod03g0338 812 CDD B3_DNA 297 372 IPR003340 GO:0003677
Dod03g0338 812 MobiDBLite consensus disorder prediction 225 250 - -
Dod03g0338 812 SUPERFAMILY DNA-binding pseudobarrel domain 297 372 IPR015300 -
Dod03g0338 812 MobiDBLite consensus disorder prediction 376 392 - -
Dod03g0338 812 MobiDBLite consensus disorder prediction 225 281 - -
Dod03g0338 812 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300-LIKE ISOFORM X1 385 749 - -
Dod03g0338 812 MobiDBLite consensus disorder prediction 761 782 - -
Dod03g0338 812 MobiDBLite consensus disorder prediction 655 812 - -
Dod03g0338 812 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300-LIKE ISOFORM X1 295 387 - -
Dod03g0338 812 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300-LIKE ISOFORM X1 11 293 - -
Dod03g0338 812 Pfam B3 DNA binding domain 305 372 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0338 Dod-Chr3 4097778 4107263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0338 295 659 B3 DNA Binding Superfamily AT4G32010 55.707 6.30e-127 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Dod03g0338 B3 2.7e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0338 - - tcc:18596944 1003.43